Ictalurus punctatus (channel catfish): 108269768
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Entry
108269768 CDS
T04658
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108269768 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108269768 (capn3a)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
108269768 (capn3a)
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C2: calpain family
108269768 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
C2c1_Nuc-II
Motif
Other DBs
NCBI-GeneID:
108269768
NCBI-ProteinID:
XP_017331252
Ensembl:
ENSIPUG00000024049
UniProt:
A0A2D0RL59
LinkDB
All DBs
Position
9:15938903..15950221
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AA seq
713 aa
AA seq
DB search
MPYTPPGFFCDRLIRERERKDGEGSVTKPLRFSGQDFKTLKQDCLQKKVLFEDDTFPASV
DSLGYKELGPKSSKVKNIVWKRPKDICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVVPQEQSFSENYAGIFHFQFWRYGDWVDVVVDDRIPTINNQLVFTKSAERNE
FWSVLLEKAYAKLHGSYETLKGGNTAEGMEDFTGGVTEFYEMKDAPKELYKIMKKALERG
SLMGCSIDALVPARLETRTTTGLVKGHAYSVIAVDECKQSAQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWSTISKEEKEKLHQQIAEDGEFWMSFADFMKNYTKLEICNLTPDALDDD
KLHKWTVSVNEGRWVRGCSAGGCRNYLDTFWTNPQYRLCLLEEDDDLDNSEAVCSFVVAL
MQKNRRKERKLGASLFTIGFSIYEVPKEMHGNKQHMQKEFFQLNSSKARSKAYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNVSEEIENRIKADHPVPAPASAGDET
EEDQHFRTIFQQIAGDEMEISANELRNVLFRVLAENKDMNKEGFSLESCRSMIAFMDMDG
TGRLNLQECRQLWNKIKEWQEIFKHYEAEQTGFISSYEMRNAINDAGFRLNNPLYNIVTM
RYANENMNIDFDSFVSCLVRLEGMFRAFQAFDQDGDGTIRLSIMEWLQLTLYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccaccaggctttttttgtgaccggctaatccgggagagagagagaaag
gatggagaaggatctgtgaccaaacctcttcgattcagtggccaggactttaagaccctg
aaacaggattgtcttcagaaaaaagtgctatttgaggatgataccttcccagccagtgtg
gattccctgggttacaaggaactgggccccaagtccagcaaggtcaagaacattgtctgg
aaaagacccaaggatatttgtgataatccacagttcatcgttggaggtgccagcagaaca
gacatctgtcagggagacttgggagactgctggctgcttgctgccattgcttgccttact
ctgaacgataagctactgtatcgggttgttcctcaagagcagagtttctctgaaaattat
gcaggaatctttcattttcagttctggcgttatggtgactgggtggatgttgtggttgat
gatcggattcctaccatcaataaccagctggtgttcaccaagtctgctgagaggaatgaa
ttctggagcgttcttcttgagaaagcatatgccaagctgcatggttcttacgagactctg
aaaggtggaaacacggctgagggaatggaagacttcactggaggagtaactgagttctat
gaaatgaaggatgcacccaaagaactttacaagatcatgaaaaaggccttggagcgaggc
tccctcatgggttgctctattgatgccttggtcccagcccgcctggaaactcgcaccacg
actgggctagtgaaaggtcatgcctattctgtaattgctgtggatgagtgtaaacagagc
gcacaaaaagaatctaaagtgcgtctggtgcgtctccgtaatccatggggccaagtggag
tggaacggaccatggagtgataattcaaaggagtggtctaccatctctaaggaagaaaaa
gaaaaattgcatcaacagattgcagaagatggagaattctggatgtcctttgctgatttc
atgaagaactacaccaagcttgaaatctgtaacctgacccctgatgctctggatgatgat
aagctccacaagtggacagtgtctgtgaatgagggccgctgggtaagaggctgctctgct
ggaggctgcagaaattatttagacacattttggacaaacccacagtatcgtctttgcctt
cttgaggaggatgacgacctggacaacagtgaggcagtctgctctttcgtggtggctctc
atgcagaaaaacagaagaaaagaacgcaaactgggtgccagtttattcactattggattt
tccatctatgaggtgccaaaggagatgcatggtaacaagcagcacatgcagaaggaattc
ttccagctgaactcatccaaggctcgcagcaaggcctacattaacttgcgggaggtgact
caacgcttcaggctgagccctggggagtatgtcattgtgccttccacctatgagccccac
caggaaggcgagtttctcctccgtgtcttctccgaaaagaagaatgtctctgaggaaata
gagaacaggatcaaagctgaccatccagtgccagctccagcctcagcaggggacgagact
gaggaggaccagcatttccgcaccatttttcagcagatagctggcgatgaaatggagatc
tcggccaacgagctgagaaacgtcctgttcagggtgttggctgagaacaaggacatgaat
aaagagggcttcagtctagagagctgccgtagcatgattgccttcatggatatggatgga
acaggcagactcaatctacaagagtgtagacagttgtggaataagatcaaagagtggcag
gaaatctttaagcactatgaagctgagcagactggcttcatcagcagctatgagatgaga
aatgcaatcaatgatgcagggttccgtctcaacaacccactgtacaacattgtgacaatg
cgttacgccaatgagaacatgaacatcgactttgacagctttgtcagctgtcttgtgcgt
ttggaggggatgttcagagcgttccaggcctttgatcaggatggagacggcactatcagg
ctgtctataatggagtggctccagttgaccctgtatgcctaa
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