Ictalurus punctatus (channel catfish): 108269806
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Entry
108269806 CDS
T04658
Name
(RefSeq) 28S ribosomal protein S5, mitochondrial
KO
K02988
small subunit ribosomal protein S5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108269806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ipu03011
]
108269806
Ribosome [BR:
ipu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
108269806
Bacteria
108269806
Archaea
108269806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_uS5m_N
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
108269806
NCBI-ProteinID:
XP_017331332
UniProt:
A0A2D0RLD9
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Position
9:32051369..32067724
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AA seq
400 aa
AA seq
DB search
MAAAARLCCVLRVPLGGVRTLVGSGSFSSVTQPGGTRIYPVAAVVASPAVWNQTRPSSFF
NKLTADELWRGVLAESGAGSRKGRGKRTKRKMKKDLNRGQNIGEGRGGFLWPGLNIPVIK
GGTIQSFSKRGEAEQQELRAELERQRDEWDRKRKMKIKRERGWSGNCWGGISLGHPDPGP
NGETYEDFDCRVIEVKSVFNMTAKEGRKRSISALVAVGNGNGAAGFALGKATDRTTALRK
AKNRAMHYLYYIERYNDHTIYHDVESTFKRTTLRMKKQNKGYGLHCHRAVITLCKLIGIK
DMYAKVEGSVNLLNITCALFQGLANQETHQMLADRKQLNVVEFSEERGPLPVVVARPQLG
ARSDPEVEDDVPNTKLHWADVQLAQGMKRSVWAGVKRTIW
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcccggctctgctgtgtcctccgcgtaccattaggaggcgttagaaca
ttagtaggttctggatcgttctcctccgtgactcagcccggtggaactcggatttatccg
gtggctgctgttgttgcgtctccggctgtttggaatcagactcgtccttccagcttcttc
aacaaactgactgcggatgagctgtggcgtggtgtgttagccgagagtggcgccggatcc
aggaagggtcgagggaaaagaaccaaacgcaaaatgaagaaagacctgaatcgaggacag
aacattggagaaggtcgtggtgggttcctctggccaggtctgaacattcccgttattaaa
ggcggaaccatccagtccttctctaaacgaggggaggcggagcagcaggagttgagggcg
gagcttgagcgtcagagggacgagtgggacaggaagaggaagatgaagataaagagagag
aggggctggtcaggaaactgctggggaggaatcagtctcggacacccagacccgggaccc
aacggagaaacctatgaggattttgactgtcgagttattgaggtaaagagtgtgttcaac
atgacagccaaagagggcaggaagaggtcgatcagtgcccttgtcgccgtgggcaacggt
aatggagctgcaggctttgctttgggaaaggccacagacagaaccacagccctgcggaag
gccaagaacagagcgatgcactacctctactacatcgagagatacaatgaccacaccatt
tatcacgatgtcgagtcgaccttcaagagaaccacactgcgcatgaaaaagcagaataaa
ggatacgggctgcactgtcacagggctgtaataactctgtgtaaactgatcgggattaag
gacatgtacgctaaagtggaaggatcagtgaatctactgaacatcacctgcgcactcttc
cagggcctggccaatcaggagacgcaccagatgctggccgacaggaagcagctgaacgtg
gtggagtttagcgaggagcgaggtccgttgcccgtggtggtggcgcggccgcagctcgga
gcccggagcgatccggaggtggaggacgacgttccgaacacgaagctgcactgggccgac
gttcagctcgctcagggcatgaagcgctcggtgtgggccggcgtcaagagaaccatctgg
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