Ictalurus punctatus (channel catfish): 108269852
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Entry
108269852 CDS
T04658
Name
(RefSeq) syntaxin-binding protein 6 isoform X2
KO
K08519
syntaxin-binding protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269852
Membrane trafficking [BR:
ipu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108269852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3-PIP2_bind
Synaptobrevin
RNase_J_b_CASP
Motif
Other DBs
NCBI-GeneID:
108269852
NCBI-ProteinID:
XP_017331427
Ensembl:
ENSIPUG00000006331
UniProt:
A0A2D0RLN7
LinkDB
All DBs
Position
9:20472301..20531686
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AA seq
210 aa
AA seq
DB search
MSAKSAINKEIFIPHNERMLAAVQVKRRTKKKIPFLATGGQGDYMTFICLSVTNKKPTEI
SITKVKQFEGSSSFVRRSQWSLNQLQQVNGIDPNRDCPEFDLTFENAFDQWVAGSAGDKC
MFVQVLHNTCQRYSAERKPEFVNCQSKLLGGNSILHSAADSVSSAVLKASQALNERGERL
GRVEEKTGDMMNSAHQFADTAHKLAMKHKC
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagtcagccatcaacaaagagatctttatcccacacaacgagaggatgttg
gcagccgtgcaggtgaagaggaggacgaagaagaagattcccttcctggctacaggtggt
cagggcgactacatgactttcatctgcctatcagtgaccaataagaagccaaccgagatc
tctattacaaaagtgaagcagtttgagggctcttcctcatttgtcagaagatcccagtgg
agtcttaaccagttgcagcaggtgaacggcattgaccctaacagggattgtcctgagttt
gacctgacatttgagaacgcgtttgaccagtgggtagccggctcagctggggacaagtgc
atgtttgtgcaggtcctacacaacacgtgccagcgctacagtgcagaaagaaaaccagag
tttgtcaactgccaatccaaactgctgggaggtaacagcatcctgcactctgcagccgac
agtgtgagtagcgcggttctgaaggccagtcaggcactgaacgagcgtggagagagactg
ggccgtgtggaggagaaaactggagacatgatgaacagtgctcatcagtttgctgatact
gcacataagttggccatgaagcacaaatgttaa
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