Ictalurus punctatus (channel catfish): 108269880
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Entry
108269880 CDS
T04658
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108269880
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108269880
09158 Development and regeneration
04382 Cornified envelope formation
108269880
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108269880
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108269880
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269880
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108269880
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108269880
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108269880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_13
EF-hand_1
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
108269880
NCBI-ProteinID:
XP_017331483
Ensembl:
ENSIPUG00000012611
UniProt:
W5U6E4
LinkDB
All DBs
Position
9:complement(4038434..4043359)
Genome browser
AA seq
455 aa
AA seq
DB search
MTSDKSAHWKDILKRRLASVKPDSRSEEEKKAEETELFTKYYTEWKGGGSKDGTFKHIPR
FYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQVPPTSGDEAMI
SYESFLKVGEKAGEKCKLFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLS
LYDVAGQGFLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKI
KIQDILACSFLDDLLELRDEELSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEEL
SRYGTGTLTSVFLDRVYQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDMENK
GYLNVFTLNYFFRAIQEQMKIHGQEPVSFQDVKDEIFDMVKPRDPYKLTLQDLVNSGQGD
TVTSILIDLNGFWTYENREVLVTTDESSSADMDDT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgacaaaagtgcacactggaaagatattttgaaaagaagactggcctcggtt
aaacctgacagcaggagtgaagaagagaagaaagccgaggagacggagctcttcactaaa
tattatacggaatggaagggaggagggagtaaagacgggacatttaaacacatcccacgc
ttctactacagacttcctgcggaggacgaggtgctgctgcagaagctgcgagaggagtcg
agagccgtgtttctgcagagaaaaagccgagagctcctcgacaacgaagagttacagaac
ctgtggtttctcctggataaacatcaagtgcctcctacgagcggtgacgaagccatgatc
agctacgagagcttcctgaaggtcggagagaaagcaggagaaaagtgcaaactcttcttc
accgccagagtgtacgccaagctgcttcataacgacccgtacggacgcatctccatcatg
cagttcttcaattacgtcatgagaaaagtgtggcttcaccagacgaggatcggtctgagt
ctgtatgacgtcgcgggacagggatttctacgcgagtctgatttggagaactacatcctg
gagctgatccccactctgcctcagctggacggcttggagaagtccttctactctttttac
gtctgtactgccgtgcgcaagttcttcttcttcctcgaccctctgcgtacaggtaaaatt
aaaattcaggacatcctggcttgcagttttctggacgatctgcttgagctcagagacgag
gaactttccaaagagagtcaggagtccaactggttctcggctccatctgcactccgggtt
tatggtcagtacctgaacctggataaggatcataacgggatgctgagtaaagaggaactg
tctcgttacggcacgggaaccttaaccagcgttttcctggaccgtgtttatcaggagtgt
ctcacctacgacggggaaatggactataagacgtacctggactttgtcctggctctggag
aacagaaaggaaccggcagctctgcagtacatcttcaagctgctggacatggagaacaag
ggctacctcaacgtcttcactctcaactacttcttcagggccattcaggagcagatgaaa
atccatggacaggagcccgtgtcttttcaggatgtcaaggacgagatcttcgacatggtg
aagcccagagacccgtataagctcacgctgcaggatctggtgaacagtggtcagggcgac
acggtcaccagcatcctcatcgacctcaacggcttctggacgtacgagaaccgagaggtg
ctggtcaccaccgacgagagcagctccgccgacatggacgacacgtga
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