KEGG   Ictalurus punctatus (channel catfish): 108269892
Entry
108269892         CDS       T04658                                 
Name
(RefSeq) nesprin-3 isoform X1
  KO
K21761  nesprin-3
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108269892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108269892
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   LINC complex
    108269892
SSDB
Motif
Pfam: Spectrin_SYNE1_2 KASH SYNE3 Spectrin Spectrin_SYNE1 Acyl-CoA_dh_C
Other DBs
NCBI-GeneID: 108269892
NCBI-ProteinID: XP_017331501
Ensembl: ENSIPUG00000005233
UniProt: A0A2D0RMX1
LinkDB
Position
9:complement(1251936..1278263)
AA seq 1143 aa
MTQQEQNEFRESWEDAHAWMQAVQERLKLNDNTEGPRAALEARLRETEKIHESEQEGRMK
MDVVLVAADALLKNGDEELKNQTHSKLKELKTLWEETSTYIVHCHSRIEWVWLHWSEYLK
AHEEFRMWLVKVQRVVEPDLELQLGLREKLWQVEHHRVICSDVKAQDPLLERLLDEASAL
YNRTQDPSVDEQAQNTLHEEYDNVRTRAEERLRLVQKVAEDDEQHQRRVRDFQTWLVSKT
EEVSRFTEIEDVSENRLQALQVLDASVAGEEETLLYIEGQAEAVKANTSPAGAELITEEV
GELRLAWQGLRQALVEIRAELEGSRDTQREYYTRREELAAGIEQLRALVRRMSQQLENKD
GERSEENMVAQWKSCTDARTVLSAEEPQVEQLKAQLKELYRFPYDSRELADELLTAVKEY
QSVKGRTFRLCSESETALKQLLQDPLHAFSPWSQQASQTLDTSTEVTDFSHIAVLVQNIE
KLLKDSVLLQERLSSLQVKADLLSAVFGEEKAQSLLEELGTDMRKREQLHSQLLQRRTRL
QELISTTKNFGDAHDSIHQKLVSIGDRFRASGGLQPDILAKKSQADQLKVIKKELEDCEA
HITALETLVSSSPANRTKFRRLYSDWKQLYKAVRTKVDESEAGILLHESFHEGLLNVEKW
LMIMRQKLESFRGPNGEWSVVNRQHEAERALGEFPARELQLHRTEAQGQAVLLKTSEDGK
VHIQRDLRRLRESWMSLHALSLNLYRLVSGRVSELGASGELDSSVHPHRADDFLEGSGGS
TIRVGADGRSGFEDDLRISPGSRSARGPGGFGAFAKHGRSVTKHDDASQTEDGEFSPPDG
ILSPDPTPSENVHAVWRDETRGRSAADEADSIAIARGFPRDGGHAHGAGAVGRSGSGNRG
RTREWVEDHSSGVEDVAVPSESRSASDPKPSHTDVRPKQLSVFMHVADASAHGSGDVTQV
RERRPDWKSRRREFDAWLRKENEKLAGITNDQRATSTKGLKRRRNALKGLRSAIPWGQAQ
FQQLLRSWQTEAQTEDVELEELRYRWMLYKSKLKDAESVKAQLKLQDEGVQQEELVRSRK
QESCCGFLCRVCRVALPLQLLLLALLLFAFLLPMMDEGTSCSMSNNFARSFNIMLRYHGR
PPT
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgacccagcaggagcagaatgagttcagggagagttgggaggacgctcacgcctggatg
caggccgtccaggaaagacttaagctcaacgacaacaccgaaggtccccgagcggctctg
gaggcccgactgagagagacggagaaaatccacgagtcggagcaggagggccggatgaaa
atggacgtggtgctggtggccgcggacgcgctcctcaagaacggagacgaggagctgaag
aaccagacgcactccaaacttaaagagctaaagactctgtgggaggagacgtccacctac
atcgtccactgccacagccgtatagagtgggtgtggctgcactggagtgagtacctgaag
gcccacgaggagttcaggatgtggctggtgaaggtgcagcgtgtggtggagcctgatctg
gagctgcagctgggtctgagggagaagctgtggcaggtggagcatcaccgcgtgatctgc
agcgacgtgaaggcccaggatccgctgctagagcgcctgctggacgaggcgtccgcgctt
tataaccgcacccaggaccccagcgtggacgagcaggcccagaacacactgcacgaggaa
tacgacaacgtccgcaccagggcggaggagaggctccgtctggtgcagaaggtcgcagag
gacgacgagcagcaccagaggcgcgttcgcgatttccaaacgtggttggtgtcgaaaaca
gaagaagtgagtcgtttcacagagatcgaggacgtttcggagaatcgactgcaagccctg
caggtcctggatgccagcgtggcgggcgaagaagagacattactgtacatcgaaggccag
gccgaggccgtgaaggccaacacgtcacctgcgggagccgagctaatcacggaggaggtg
ggagagctgcggctggcatggcaggggctgcggcaggcgctggtggagatccgcgccgag
ctggagggctccagggacacccagagagagtactacacccggcgagaggagctggcagcg
ggcatcgagcagctccgagccctcgtgcgcagaatgagccagcagctggagaataaagat
ggagagaggagcgaggagaacatggtggctcagtggaagagctgtacagatgcgaggacg
gtcctctcggccgaggagcctcaggtcgagcagctcaaagctcagctgaaggagttatac
cgcttcccgtatgattcccgagaacttgctgatgaattactgactgcggtgaaagagtac
cagagcgtgaaaggacgcacgttccggctctgctcggagagcgagacagctctgaagcag
ctcctacaggaccccctgcatgcctttagtccgtggagccagcaggcgtctcagacgctc
gacacctcgaccgaagtcactgacttctcccacatcgctgtgctcgtgcagaacatcgag
aagctgctgaaagacagcgtgctgctgcaggagaggctgagctcgctgcaggtgaaagct
gacctgctgagcgccgtgtttggcgaggagaaagcccagagcctgctggaggagctcggt
acagacatgaggaagagagagcagcttcacagccaacttctgcagaggagaactcgactg
caggaattaatatcgacgacaaagaacttcggtgacgctcacgactctattcatcagaag
ctcgtgtctataggcgacaggtttcgcgcttcaggcggacttcaaccggatattctcgct
aaaaagagccaggccgaccaacttaaggtcattaagaaagaactggaagactgcgaggct
cacatcaccgctctggagacgctcgtctcgtccagcccggctaacaggaccaagtttagg
cgtctctattccgactggaagcagctctataaagctgtccggacgaaggtggacgaaagt
gaggcgggtattttgctgcacgagagcttccatgagggtctgctgaacgtggagaaatgg
ctgatgatcatgaggcagaagctggagtcgttccgaggaccgaacggagagtggagcgtg
gtgaaccgacagcatgaagcagagagggcgctgggcgagtttccagcaagggagctgcag
ctgcacaggaccgaagcgcagggtcaagccgtgctgctgaaaacctccgaggacggcaaa
gttcacattcagcgtgacctcaggcgcctgcgtgagtcctggatgtctctccacgcgctc
agtctgaacctgtacagactcgtgagtggacgcgtgtcggagctcggtgcttcaggagaa
ctcgactcttcagtacacccgcaccgtgcagacgacttcctggagggaagcggcggatcc
acaatccgagtcggagcagacggccgctcgggattcgaggacgaccttcggatttctccg
ggctcgcggtcggccagaggtccaggaggattcggggctttcgccaaacatgggagatcc
gtaaccaaacacgacgatgcgtctcaaaccgaggacggagagttcagtcctccggacgga
atcctatctcctgatccgacgccgtccgagaacgtccacgcagtctggagagacgaaacg
agaggccgttccgcagccgacgaagcggactcgatcgccattgcacgaggatttccgaga
gacggaggacacgcccacggggcaggagcggtcgggagaagtggatccgggaatcgaggg
agaacaagggaatgggttgaagaccactcgtccggagtggaagacgtcgcggtgccgagc
gaaagccggagtgcaagcgatccgaaaccctcgcatacagatgttcgaccaaaacagctg
tctgtgtttatgcacgtcgcggacgcttcagctcacggctccggagacgtcactcaggtg
agagagcgcagacccgactggaaatcgcgcaggagagagtttgacgcctggctgcgtaaa
gagaacgagaaactcgcagggattacaaacgaccaaagagcgacgagtaccaaaggactg
aagagacgacggaacgcactcaagggtctgcgttccgccattccgtggggtcaggctcag
ttccagcagctactgcgctcctggcagactgaagcacagaccgaggacgtggaactggag
gagcttcgctacagatggatgctttataaatccaaactgaaggacgctgaaagtgttaaa
gctcagctcaaactccaggatgaaggagtccagcaggaggagctcgttcgatccagaaag
caggagagctgctgtgggttcctgtgccgtgtgtgtcgtgtggctcttcctctgcagctg
ctgctcctcgcgctgctgctcttcgccttcctcctgcccatgatggacgagggcacgagc
tgctccatgtccaacaacttcgcccgctccttcaacatcatgctgcgctaccatggccgt
ccgcccacctaa

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