Ictalurus punctatus (channel catfish): 108269892
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Entry
108269892 CDS
T04658
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108269892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269892
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
108269892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
Spectrin
Spectrin_SYNE1
Acyl-CoA_dh_C
Motif
Other DBs
NCBI-GeneID:
108269892
NCBI-ProteinID:
XP_017331501
Ensembl:
ENSIPUG00000005233
UniProt:
A0A2D0RMX1
LinkDB
All DBs
Position
9:complement(1251936..1278263)
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AA seq
1143 aa
AA seq
DB search
MTQQEQNEFRESWEDAHAWMQAVQERLKLNDNTEGPRAALEARLRETEKIHESEQEGRMK
MDVVLVAADALLKNGDEELKNQTHSKLKELKTLWEETSTYIVHCHSRIEWVWLHWSEYLK
AHEEFRMWLVKVQRVVEPDLELQLGLREKLWQVEHHRVICSDVKAQDPLLERLLDEASAL
YNRTQDPSVDEQAQNTLHEEYDNVRTRAEERLRLVQKVAEDDEQHQRRVRDFQTWLVSKT
EEVSRFTEIEDVSENRLQALQVLDASVAGEEETLLYIEGQAEAVKANTSPAGAELITEEV
GELRLAWQGLRQALVEIRAELEGSRDTQREYYTRREELAAGIEQLRALVRRMSQQLENKD
GERSEENMVAQWKSCTDARTVLSAEEPQVEQLKAQLKELYRFPYDSRELADELLTAVKEY
QSVKGRTFRLCSESETALKQLLQDPLHAFSPWSQQASQTLDTSTEVTDFSHIAVLVQNIE
KLLKDSVLLQERLSSLQVKADLLSAVFGEEKAQSLLEELGTDMRKREQLHSQLLQRRTRL
QELISTTKNFGDAHDSIHQKLVSIGDRFRASGGLQPDILAKKSQADQLKVIKKELEDCEA
HITALETLVSSSPANRTKFRRLYSDWKQLYKAVRTKVDESEAGILLHESFHEGLLNVEKW
LMIMRQKLESFRGPNGEWSVVNRQHEAERALGEFPARELQLHRTEAQGQAVLLKTSEDGK
VHIQRDLRRLRESWMSLHALSLNLYRLVSGRVSELGASGELDSSVHPHRADDFLEGSGGS
TIRVGADGRSGFEDDLRISPGSRSARGPGGFGAFAKHGRSVTKHDDASQTEDGEFSPPDG
ILSPDPTPSENVHAVWRDETRGRSAADEADSIAIARGFPRDGGHAHGAGAVGRSGSGNRG
RTREWVEDHSSGVEDVAVPSESRSASDPKPSHTDVRPKQLSVFMHVADASAHGSGDVTQV
RERRPDWKSRRREFDAWLRKENEKLAGITNDQRATSTKGLKRRRNALKGLRSAIPWGQAQ
FQQLLRSWQTEAQTEDVELEELRYRWMLYKSKLKDAESVKAQLKLQDEGVQQEELVRSRK
QESCCGFLCRVCRVALPLQLLLLALLLFAFLLPMMDEGTSCSMSNNFARSFNIMLRYHGR
PPT
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaggagcagaatgagttcagggagagttgggaggacgctcacgcctggatg
caggccgtccaggaaagacttaagctcaacgacaacaccgaaggtccccgagcggctctg
gaggcccgactgagagagacggagaaaatccacgagtcggagcaggagggccggatgaaa
atggacgtggtgctggtggccgcggacgcgctcctcaagaacggagacgaggagctgaag
aaccagacgcactccaaacttaaagagctaaagactctgtgggaggagacgtccacctac
atcgtccactgccacagccgtatagagtgggtgtggctgcactggagtgagtacctgaag
gcccacgaggagttcaggatgtggctggtgaaggtgcagcgtgtggtggagcctgatctg
gagctgcagctgggtctgagggagaagctgtggcaggtggagcatcaccgcgtgatctgc
agcgacgtgaaggcccaggatccgctgctagagcgcctgctggacgaggcgtccgcgctt
tataaccgcacccaggaccccagcgtggacgagcaggcccagaacacactgcacgaggaa
tacgacaacgtccgcaccagggcggaggagaggctccgtctggtgcagaaggtcgcagag
gacgacgagcagcaccagaggcgcgttcgcgatttccaaacgtggttggtgtcgaaaaca
gaagaagtgagtcgtttcacagagatcgaggacgtttcggagaatcgactgcaagccctg
caggtcctggatgccagcgtggcgggcgaagaagagacattactgtacatcgaaggccag
gccgaggccgtgaaggccaacacgtcacctgcgggagccgagctaatcacggaggaggtg
ggagagctgcggctggcatggcaggggctgcggcaggcgctggtggagatccgcgccgag
ctggagggctccagggacacccagagagagtactacacccggcgagaggagctggcagcg
ggcatcgagcagctccgagccctcgtgcgcagaatgagccagcagctggagaataaagat
ggagagaggagcgaggagaacatggtggctcagtggaagagctgtacagatgcgaggacg
gtcctctcggccgaggagcctcaggtcgagcagctcaaagctcagctgaaggagttatac
cgcttcccgtatgattcccgagaacttgctgatgaattactgactgcggtgaaagagtac
cagagcgtgaaaggacgcacgttccggctctgctcggagagcgagacagctctgaagcag
ctcctacaggaccccctgcatgcctttagtccgtggagccagcaggcgtctcagacgctc
gacacctcgaccgaagtcactgacttctcccacatcgctgtgctcgtgcagaacatcgag
aagctgctgaaagacagcgtgctgctgcaggagaggctgagctcgctgcaggtgaaagct
gacctgctgagcgccgtgtttggcgaggagaaagcccagagcctgctggaggagctcggt
acagacatgaggaagagagagcagcttcacagccaacttctgcagaggagaactcgactg
caggaattaatatcgacgacaaagaacttcggtgacgctcacgactctattcatcagaag
ctcgtgtctataggcgacaggtttcgcgcttcaggcggacttcaaccggatattctcgct
aaaaagagccaggccgaccaacttaaggtcattaagaaagaactggaagactgcgaggct
cacatcaccgctctggagacgctcgtctcgtccagcccggctaacaggaccaagtttagg
cgtctctattccgactggaagcagctctataaagctgtccggacgaaggtggacgaaagt
gaggcgggtattttgctgcacgagagcttccatgagggtctgctgaacgtggagaaatgg
ctgatgatcatgaggcagaagctggagtcgttccgaggaccgaacggagagtggagcgtg
gtgaaccgacagcatgaagcagagagggcgctgggcgagtttccagcaagggagctgcag
ctgcacaggaccgaagcgcagggtcaagccgtgctgctgaaaacctccgaggacggcaaa
gttcacattcagcgtgacctcaggcgcctgcgtgagtcctggatgtctctccacgcgctc
agtctgaacctgtacagactcgtgagtggacgcgtgtcggagctcggtgcttcaggagaa
ctcgactcttcagtacacccgcaccgtgcagacgacttcctggagggaagcggcggatcc
acaatccgagtcggagcagacggccgctcgggattcgaggacgaccttcggatttctccg
ggctcgcggtcggccagaggtccaggaggattcggggctttcgccaaacatgggagatcc
gtaaccaaacacgacgatgcgtctcaaaccgaggacggagagttcagtcctccggacgga
atcctatctcctgatccgacgccgtccgagaacgtccacgcagtctggagagacgaaacg
agaggccgttccgcagccgacgaagcggactcgatcgccattgcacgaggatttccgaga
gacggaggacacgcccacggggcaggagcggtcgggagaagtggatccgggaatcgaggg
agaacaagggaatgggttgaagaccactcgtccggagtggaagacgtcgcggtgccgagc
gaaagccggagtgcaagcgatccgaaaccctcgcatacagatgttcgaccaaaacagctg
tctgtgtttatgcacgtcgcggacgcttcagctcacggctccggagacgtcactcaggtg
agagagcgcagacccgactggaaatcgcgcaggagagagtttgacgcctggctgcgtaaa
gagaacgagaaactcgcagggattacaaacgaccaaagagcgacgagtaccaaaggactg
aagagacgacggaacgcactcaagggtctgcgttccgccattccgtggggtcaggctcag
ttccagcagctactgcgctcctggcagactgaagcacagaccgaggacgtggaactggag
gagcttcgctacagatggatgctttataaatccaaactgaaggacgctgaaagtgttaaa
gctcagctcaaactccaggatgaaggagtccagcaggaggagctcgttcgatccagaaag
caggagagctgctgtgggttcctgtgccgtgtgtgtcgtgtggctcttcctctgcagctg
ctgctcctcgcgctgctgctcttcgccttcctcctgcccatgatggacgagggcacgagc
tgctccatgtccaacaacttcgcccgctccttcaacatcatgctgcgctaccatggccgt
ccgcccacctaa
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