Ictalurus punctatus (channel catfish): 108269921
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Entry
108269921 CDS
T04658
Symbol
vsnl1b
Name
(RefSeq) visinin-like protein 1b
KO
K19936
visinin-like protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269921 (vsnl1b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108269921 (vsnl1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
108269921 (vsnl1b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
EF-hand domain-containing proteins
Calcium binding proteins
108269921 (vsnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Dockerin_1
EF_EFCAB10_C
Caleosin
WEF-hand
p25-alpha
IL3
MATalpha_HMGbox
DUF5382
Motif
Other DBs
NCBI-GeneID:
108269921
NCBI-ProteinID:
XP_017331560
Ensembl:
ENSIPUG00000003451
UniProt:
W5UTM4
LinkDB
All DBs
Position
9:19068792..19076327
Genome browser
AA seq
191 aa
AA seq
DB search
MGKQNSKLTPEVMEDLVKNTEFNEHELKQWYKGFLKDCPSGKLNLDEFQQLYVKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDRIFSKMDKNNDDQITLDEFKEAAKSDPS
IVLLLQCDMQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacagaacagtaagctaacccctgaggtaatggaggacctggtgaagaacaca
gaatttaatgaacatgagctcaagcagtggtacaagggcttcctgaaagattgtcccagc
ggtaaactaaacctggatgaattccagcaattgtatgttaagttcttcccttatggtgat
gcatcaaagtttgcacagcatgctttcagaacctttgataagaatggagatggtactatt
gacttcagagagttcatttgtgccctgtccatcacatcacgaggaagctttgagcagaag
cttaactgggccttcaacatgtatgacctagatggagatggcaaaatcactcgagtggag
atgctggaaattatagaggctatttacaaaatggttggcactgtgatcatgatgaagatg
aatgaggacggcctgacaccagagcagagggtggatagaatctttagcaagatggataag
aacaacgatgaccaaatcactcttgatgagtttaaggaagcagcgaagagtgacccgtct
attgtactgcttttgcagtgcgacatgcaaaagtga
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