Ictalurus punctatus (channel catfish): 108269924
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Entry
108269924 CDS
T04658
Name
(RefSeq) lateral signaling target protein 2 homolog isoform X1
KO
K24780
lateral signaling target protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269924
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Others
108269924
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
108269924
NCBI-ProteinID:
XP_017331564
Ensembl:
ENSIPUG00000023881
UniProt:
A0A2D0RM23
LinkDB
All DBs
Position
9:15118166..15134740
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AA seq
966 aa
AA seq
DB search
MMNRFRKWLYKPKRSDPQLLAQFYYADEELNQVASELDSLDGRKDPQRCTLLVNQFRSCQ
DNVLNIINQIMDECIPEDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNREIE
SMAMRPLAKDLTRSLEEVRNITRDQALRDLNFYTERMREALRQFDGLFAEFELSYVSAMV
PVKSPKEYYVQQEVIVLFCETVERALKLGYLTQDMIDDYEPALMFTIPRLAIVCGLVVYP
DGPLNLENKPEDMSELFRPFRTLLKKIRDLLQTLTDEELTTLERNLCISQDGEFPGDPIS
STSESATSINSKSQAEESQKREEQKEVEKGTELVLCSSQCEEEDAWEKDQEQQEVPREGD
EDTEVDLACSMQYDEEEIEQLNMMVHRVGDHMSTLLSPPSQRPSPAHYHRKKQTSVGGSS
VPSSTENSPHRAPGSQHEEDERVFFMDDLEGMGSVGDAGTSSGELRQGQRVSPIVNLGSL
KHIRPEITSDSTSNGWMTACQSNEDFDQSSQDKLCLSSVPAGTPETLPLVNGWEGQLDGE
EGEGGEPAEVIAHRTGGMKLSATVIFNPRSPNQPELVVLPRSTEGTAHRLLNSCVCCTAG
CLDAHDDPTNTDSTTEDGILEFRKCKLAITSTVIQSAMGACGTGKGDAPLPLPPPPGPQQ
LREEAEDQDGGRLPHAPCCEKCLANSSKLSPHRDTGEDESRDGYAHQERACRVMASSASK
EKQPKEDNKNDSSLQGSPLSSGTSSDCESVSVTTCSLSSSCTPSSLTTSSEMSEELDHQE
LQLALQASKLVAHNKIRARFHSSSDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVM
ATKSEQGDNEKQNKGPRVGSAGLEDCALCQETMTSSELAAKARDGQFEDPPEWVPDEACN
ACIACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQMKPVRVCTHCYMFHVTPFY
SDRTSV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgcttccgaaagtggctgtataagccgaagaggtcggaccctcaattactc
gcccagttttactatgccgatgaagagctgaaccaggtggcctcggagctggatagtctg
gacggcaggaaggaccctcaaagatgcacactgcttgtcaaccagttccgctcgtgccag
gacaatgtgctgaatatcataaaccagatcatggatgagtgtataccagaagacagagca
aacagagacttctgtgtgaaatttccggaggagatccgccatgacaacctcgcaggacag
ctgtggtttggggcagagtgtctagcagcaggctcaatcataatgaaccgggagattgag
agtatggcgatgcggccactggccaaagacttgacacgcagtttggaggaggtgcgcaac
atcacccgtgaccaagcgctgcgagacctcaacttctacacagagcgcatgagggaggca
ctgcgacagtttgacggcctatttgccgagtttgagctcagttatgtatcagccatggtg
cctgtaaagtctcctaaagagtactacgtccagcaggaggtgattgtgctcttctgtgag
acggtagagagggccctaaaacttggctatctcacacaagacatgattgatgattatgaa
cctgctctcatgtttacaatcccccgactagcaattgtgtgcggacttgttgtgtatcct
gatggacctcttaacctggaaaacaaaccagaggacatgtcagaactcttccgacctttt
cgcacattactgaagaaaattagggacctgttgcagactctgacagatgaggagttaacg
accctggagcggaatctgtgtatctcgcaggatggggagtttcctggagatcctatctcc
tctacctcagagtctgctacctctatcaactccaagagtcaggcggaggagtcccagaaa
agagaagagcaaaaggaagtggagaaggggacagagctggttctatgttcctctcagtgt
gaggaggaggatgcatgggagaaggaccaggaacagcaggaggttccaagggaaggagat
gaggacactgaagtggacctggcctgttccatgcagtatgacgaagaagagattgagcag
ctcaacatgatggtacaccgtgttggtgatcacatgtccacactgctctcaccaccaagc
cagaggccatctccagctcattatcaccgaaaaaaacagactagcgtgggtggatctagt
gtgccctcaagcactgaaaactctcctcatcgagctcctggctcccagcacgaggaagac
gagcgagtcttcttcatggacgacctggaaggcatgggcagtgttggagatgctggaact
agctcaggggaactccgacaggggcagcgagtctctccaatcgtgaacctcggatccctc
aagcacatcaggccagagattacaagtgactccacctccaatggatggatgacagcttgt
caatcaaatgaggattttgatcagagcagccaggataaactgtgcctctcttctgtacct
gcaggaaccccagaaaccttaccacttgtgaatggctgggaggggcagttggatggggag
gaaggggaagggggggagccagcagaggtcattgcccaccggacaggtgggatgaagctg
tcagccactgtgatctttaacccacgctcacctaaccagcctgagttggtggttttgcca
cgctcaaccgagggaactgctcaccgcctgctcaactcctgtgtgtgctgcacagcagga
tgtctcgatgcccatgatgaccccactaacacagatagcacaactgaagatgggattctg
gagtttaggaagtgcaagcttgccatcacaagcaccgttatccagtctgcaatgggagcc
tgtggcacagggaagggagatgcccctttgccccttccgcctccacctggcccacaacaa
ttgagagaggaggctgaggaccaagatggaggaaggcttcctcatgccccctgttgtgag
aagtgccttgccaatagctccaagctgtccccgcacagagatactggagaggacgagtca
agagatggatacgcccatcaggaaagagcctgcagagtaatggctagctctgcatcaaag
gagaaacagcccaaagaagacaacaaaaatgactccagtttacagggatcccctctcagt
tcaggcaccagcagtgactgtgagagtgtgtctgtcaccacatgcagtctgtccagttca
tgcacccccagtagtttgaccaccagctctgagatgtctgaggagcttgatcaccaggag
cttcagctggccctgcaagcttctaaactggttgctcacaacaaaatacgtgctcgcttc
catagcagtagtgacctcatccatcgtttgtttgtctgcatatcaggtgtggctgatcaa
ttgcaaacaaattatgcaagtgacctgaggagcatcctgaagacgctgtttgaggtcatg
gcaacaaaatccgagcaaggggacaacgagaagcaaaataaaggaccgagagtaggaagt
gctggattagaagactgcgctctttgtcaagagacaatgacctcgtcagaactcgcagca
aaggcgcgggacggtcagtttgaagaccctcctgagtgggttccggatgaggcctgtaac
gcctgtatcgcctgcaaggctcctttcactgtcatccggaggaagcaccactgtaggagc
tgtggaaagatcttctgctcccgctgctcttcacactcagccccgttaccacgctatggt
cagatgaagcctgtgagggtgtgcactcactgctacatgtttcacgtcacacctttctac
agtgacaggactagtgtttga
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