Ictalurus punctatus (channel catfish): 108269926
Help
Entry
108269926 CDS
T04658
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108269926 (tcea3)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108269926 (tcea3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
DUF4903
Motif
Other DBs
NCBI-GeneID:
108269926
NCBI-ProteinID:
XP_053538813
UniProt:
A0A9F7RLI0
LinkDB
All DBs
Position
1:complement(22505184..22518992)
Genome browser
AA seq
679 aa
AA seq
DB search
MTREEELIRIAKKLDKMVSRNNTEGALDLLRELQKFSMTLKLLQDTRIGMSVNGIRKHCR
DEDVVSLAKILIKNWKRLLESGHSQKAERPNEMKNGSGASTQSLSGPSPDTESSPKSSLN
TPKKPVDKHRKERTEAVFKKERQESDHKKEKHISNHTKESERMNAMDSSVSSFGSPFHPP
KCSSMEVKKDRREAPDPKSPPHLHLHHSLPAHIRKHQPEVKKDRRVTPETLTSQHSQSHH
SSSHKRPSLEVSKERKKTPDQNAPLPPLPLHLHPPAQKQCVLEMKKPRKETVNPDAPLPP
LPLHLHPPTLTKHPSLDMQKDKEKESKDKERKDMPAPKRSAQQLISEHKKHSRDLGDSKP
AKRLSTDMKKDRRDSSDFSQQSLKKPINDAKKERKDSTDSKSGQRQQLSDAKPTRRDSVN
SKSGSSPLSKKLSEERKEYHGPKLTLPGAIQRKVSTDSNDGRKSKPETPKTPSTPTTPLS
PPFSPAGGPLSPHLLTGDSIRDKCIEMLSAALRTDDDYKYYGANCDAMGAEIEDHIYQEI
KATDMKYKNRVRSRISNLKDPKNPNLRKNVLGGAIDLSRIATMTAEEMASDELKQLRNIL
TQEAIREHQMAKTGGTVTDLLQCGKCRKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKY
TWVTRNRKLFHHDFLFKRV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagaggaggagctgatacggattgcgaaaaagctagacaaaatggtgtctagg
aataacacggaaggtgctcttgacctgttgagagaattgcaaaaattcagtatgactctt
aagttgcttcaggacacaagaattggaatgtctgtcaatggaataagaaagcactgcaga
gatgaggatgtcgtctcccttgcgaagattcttatcaaaaactggaagaggctattagaa
tctggccattcccagaaggctgaaagaccaaatgagatgaaaaatgggagtggggccagt
acacaatcactcagtggaccctctccagacacagagtcaagcccaaaatccagtttaaac
actcccaagaaacctgttgataagcacagaaaagagagaactgaggcagtttttaagaaa
gaaagacaagaaagtgaccacaaaaaggaaaaacacatcagtaatcacacaaaggagagt
gagaggatgaacgctatggattcaagtgtatcctcctttggttcacccttccatcctccc
aagtgttcatctatggaagtgaagaaagacaggagagaggctcccgatcccaagagtcct
cctcatcttcatcttcaccattctcttcctgctcatattcgtaaacaccaacctgaagtg
aagaaagacaggagagtgacaccagaaactttgacctctcaacattctcagtctcatcat
tcctcttctcataaaaggccatctctagaggtttctaaagagagaaaaaagactccagat
caaaatgccccacttcctcctttgcctcttcatctacatcctcctgctcagaaacaatgc
gttttagagatgaagaaaccgaggaaagagactgtgaatcctgatgcccctcttcctcct
ctgcctctccatcttcatccccctactcttacaaagcatccttcattagacatgcagaag
gacaaagaaaaagaaagcaaagacaaagaaagaaaagacatgccagcaccaaaacgaagt
gcacagcagctgatatctgaacataagaaacacagcagagatctgggggacagtaaacca
gccaaaagactgtctacagacatgaagaaagacagaagggattcctcagatttcagtcag
cagtctctgaaaaagcccattaacgatgcaaagaaagaaagaaaagactccactgactct
aagtctggccagagacagcagttaagtgatgccaaacctacgagaagggactctgttaac
tcgaagtctggaagctcacccctgtctaagaaactctcggaggaaaggaaagaatatcat
ggccctaagttgactctccctggagctatacagagaaaggtgtccacagacagtaatgat
ggacgtaaaagtaaacctgagaccccgaagacacccagcacccccaccacccccttgtcc
cctccctttagccctgctggtggtcctctctcccctcacctgctcactggggattccatc
agggacaaatgcattgaaatgctgtcagccgcactacgcacagatgatgactacaaatat
tatggagcaaactgtgatgccatgggagctgaaattgaggatcatatctaccaggagatt
aaagccacagatatgaaatataaaaacagagtacgtagccgcatcagcaacctgaaagat
ccaaagaatccgaatttacgcaagaatgtcctgggaggagctattgacctgagtcgcata
gccaccatgactgcggaggaaatggccagtgatgaactgaagcagctgaggaacattctg
actcaggaagccatccgcgagcaccagatggccaagactggaggcacagttactgacctg
ctgcagtgtggcaaatgcaggaaaaagaactgcacatacaaccaggtgcaaacccggagt
gctgatgaaccgatgaccacatttgtactgtgcaatgagtgtggaaaccgctggaagtac
acctgggtgactaggaacaggaaattgttccaccatgacttcctgtttaaaagggtataa
DBGET
integrated database retrieval system
