Ictalurus punctatus (channel catfish): 108269952
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Entry
108269952 CDS
T04658
Name
(RefSeq) tetratricopeptide repeat protein 8 isoform X1
KO
K16781
tetratricopeptide repeat protein 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108269952
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
BBSome
108269952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_14
TPR_16
TPR_17
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_MalT
TPR_15
PknG_TPR
ARM_TT21
TPR_30
ANAPC3
TPR-S
Motif
Other DBs
NCBI-GeneID:
108269952
NCBI-ProteinID:
XP_017331624
Ensembl:
ENSIPUG00000007300
UniProt:
A0A2D0RM82
LinkDB
All DBs
Position
9:21319980..21328314
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AA seq
507 aa
AA seq
DB search
MEVTVSMDPLFLAWSNFRRRKFQKCSDLCTKVLEDNPYDQAAWSLKTRALTEMVYIDEVE
VDQEGIAEIMLDESAIAQVARPGTSLRLPGTSHGGGPTPAIRPVTQSGRPITGFVRPSTQ
SGRPGTMEQAIRTPRTANTARPVTSASGRFVRLGTASMLTHPDGPFINLSRLNLPKYAQK
PNLSKSLFEYIFHHENDVKNALDLAALATEHAQFKDWWWKVQLGKCYYRLGLYREAEKQF
RSALNHQEFVDTYLYLGKVYQRLDQPITALNLFKQGLDHFPGEVTLLTGIARIHEEMNNV
TSATEYYKDVLKQDNTHVEAIACIGSNHFYTDQPEIALRFYRRLLQMGVYNCQLYNNLGL
CCFYAQQYDMTLSSFERALALVSSDEEHADIWYNIGHVAVGIGDLTLAYQCFKLTLAFNN
DHAEAYNNLAVLELRKGRIEQAKALLQTAASLAPHMYEPHFNFSVLSDKVGDLQSSYMAA
QKSEDAFPEHVDTQQILKTLRQHFAVL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaactgtatctatggatcctctttttcttgcatggagcaattttaggagacgg
aagttccagaaatgctcggatctttgcacaaaggtgttggaggacaatccgtacgaccag
gcagcttggagcctgaagacaagggctctgactgagatggtgtacattgatgaagtggaa
gttgaccaggagggcattgcagaaataatgttggacgaaagtgccattgcacaagtggca
cgacctggaacatcgctgaggctccctggaacaagtcatggtggaggacctactccagct
atcagaccagtgacccagtcaggacgtcccattacaggatttgtaagacccagcactcag
tctggtcgaccagggacaatggaacaagccatcagaacacctcgaactgcaaacactgcc
cgtccggtcaccagtgcttctgggagatttgtccgattgggcacggcttctatgttaaca
catccggatggaccatttataaacttgtcccggttaaatttgccaaagtatgcacagaaa
ccaaatttatccaagagcttatttgaatacatctttcaccatgagaacgatgtcaaaaat
gctttggacctagctgcactcgctaccgagcacgcacagttcaaagactggtggtggaaa
gtccaacttgggaaatgttattacaggcttggtttgtatcgtgaagctgagaaacaattc
agatcagccctcaatcatcaagagtttgtagatacttacctctaccttgggaaggtatat
cagcgattggatcaacccataactgccctgaacctctttaaacaaggcctggaccatttc
ccaggagaagtgactttgctgactgggattgctcgcattcatgaggagatgaacaacgtc
acttcagctacagagtattataaagatgtcttaaagcaggacaacacacatgtggaggcc
attgcctgcataggaagcaaccatttctatacagaccagccagagatcgccttgcgtttc
tacagacggttgctacagatgggtgtgtataactgccaactttacaataatctgggcctg
tgctgtttttatgctcagcagtatgacatgactctgtcctcatttgagagagcattagcc
ctggtttccagtgatgaggaacacgctgacatctggtataatattggacatgttgcagtg
ggtattggtgacttgactttagcttatcagtgctttaaactaactttggcatttaacaat
gatcatgctgaggcttacaacaacttagcagtgctggagctacgcaaaggacgcattgag
caggcaaaagcccttttgcaaacagctgcttctctcgcgccccacatgtatgaaccacat
ttcaacttctctgtactgtcagataaggtgggtgaccttcagagtagttacatggctgcc
cagaagtcagaggatgcttttccagagcacgtggatactcagcagatcctaaagaccctc
agacagcactttgctgtgctttga
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