Ictalurus punctatus (channel catfish): 108269965
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Entry
108269965 CDS
T04658
Symbol
emilin1b
Name
(RefSeq) EMILIN-1b
KO
K24246
emilin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108269965 (emilin1b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
108269965 (emilin1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
ATG17_like
OmpH
Snapin_Pallidin
Baculo_PEP_C
Fib_alpha
AATF-Che1
Lebercilin
DUF4407
Prominin
DUF1690
PTHB1_hp
Spectrin
Laminin_II
DUF4618
Motif
Other DBs
NCBI-GeneID:
108269965
NCBI-ProteinID:
XP_017331643
Ensembl:
ENSIPUG00000011880
UniProt:
A0A2D0RMA1
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All DBs
Position
9:4236948..4255145
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AA seq
1056 aa
AA seq
DB search
MAGVRLVLLMVCVCVCGASWGGQQRYSLYAGSREQGHTGDGARAASRHRNWCAYVVKKTV
SCVVEDGVETYVKPDYQPCSWGVQCARVLMYRTYLRPRYKVAYKLITEMEWKCCHGYSGE
DCNTHNGGENGGSVTQISTARPWTKPSNPGHTGHGQNGGSGRGDSDKMKQMEDKIQRLTK
DVHDLQSTLRTMNEKFQEETKNPGSSGGNTPADAAQPEMKETIHNIQTKLDQLDNRTQAH
DRTLDSINNHLVNGRGGNDLDGHDGDRFNILKEEILRELERRVSLSCTACQAGVEDLRRE
QQRDRERISALEKKINDMEQRNRLVLEGLRRDLSRSQTCCDKIRDLETNFRDVDKKITST
SETCTSLEDRLEKVLQGIGGGGGVGGAGENGGGQRRLEETLEDWERRINSTLQRTEENCA
YMDNDLKDLFQKGLIDLRNEFNAHLDVQDNRNTDLDVDIRFMKETLFEQDKRLSRLENAT
SHMDRRINECSSCSGSRRPPGGSGMRPTDDTDTVKSLEWRVVANEDEITRFDTRLKDLSV
SGDSLLDKVIDLSHDVRKIKEVTGDNGEHFTRIIHEIENCQSDLCKTVQDDLRKLKNITN
HAMDKWQTDVNYIKGKVDSGCSDGCSTLQEEVNKLKEDVHKCKICLETPAGPGTEPGDLD
GPQKPLDGHSVISNNANLGSIQGELSGVILTFSSINDTLKGLEHSTRKHDSVITDLGNTK
DKIISELDKIQQEVTEHIEDSKMRFDNIERDLKRYFVERTGNGLDKRITKLEGVCGRLDS
VSENLQKIKEGLNKHVTGLWSCVNGLNTTVIHHSSFIDTMETTHLDNIHGKIKQLNSSIL
HLLKEFRSLMEHDFTGLPGPPGPQGETGERGFPGHPGLPGPQGPPGKPGVEGPRGPPGLS
GERGFPGVDANVPKVSFSAALTKQMTSSGTIVFDKIFVNKGNFYDPQTGIFKAPRDGHYF
FSAVLTGHKNEKIEAVLSKSNYGIARVDSAGYQPEGLENKPVAETKPTPGSLAVFNIILP
LQSDDTVCVDLVMGKLAHSVEPLTMFSGALLYEDYS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggctggagttagactggttcttctgatggtgtgtgtgtgtgtgtgtggagcctcgtgg
ggcggacagcagcgctacagcctgtacgcagggagcagggagcagggacacaccggggac
ggagcccgagccgccagcaggcacaggaactggtgtgcgtatgtggtgaagaagacagtg
agctgtgtggtggaggatggagtggagacgtacgtgaagcctgattatcagccatgttcc
tggggagtgcagtgtgctcgcgtcttaatgtatcggacgtatctgaggcccagatataag
gtagcgtacaaactgatcactgagatggagtggaagtgttgccatggatacagcggagag
gactgtaacacacataatggcggcgagaacggaggatctgtcactcagatttccacagcg
agaccgtggactaaaccctcgaacccgggacacacaggacacggacagaacggagggagc
gggagaggcgacagcgacaagatgaaacagatggaggacaaaatccaacgtttgactaaa
gacgttcatgatttgcaatcgacgttacgcaccatgaacgaaaagtttcaggaggagaca
aaaaatcccggatcgagcggtgggaacacgccggcggacgcggctcagcctgaaatgaag
gaaacgattcacaacatccagaccaaactggaccagctggacaatcggactcaggctcac
gatagaactctcgatagcatcaataaccacctggttaacggaagaggcgggaatgatctg
gacggccatgatggagacagattcaacatcttgaaggaggaaatcctgcgcgagttggaa
cgccgggtttctctgtcctgcactgcttgccaagccggtgtagaagacctgcggagagag
cagcagagggacagagagaggatctcagctttggaaaagaagattaacgacatggaacag
cggaaccgcctggttctggaaggactgcgtcgggatctgagtcgatctcaaacctgctgc
gataaaatccgggatcttgagacgaatttcagggatgtggataagaagatcacgtcgaca
tccgagacttgtaccagcctcgaggatcgtttggagaaagtgcttcaaggaataggaggt
ggtggaggcgtcggaggagccggagaaaatggaggaggacagagaagattggaggaaaca
ctggaagactgggaaagacggattaacagcacactgcagaggacggaagaaaactgcgct
tacatggacaacgatttgaaggatttgttccaaaaaggcctcatagacctacgcaatgag
ttcaacgctcacctcgatgttcaagacaacagaaacacagatctagatgtggacatcagg
ttcatgaaagaaaccttgtttgaacaggacaagcgcttgtctcggctggagaatgccacg
tctcatatggatcggagaataaacgaatgctcttcgtgctctggttctagaagaccccca
ggaggaagtggaatgagacccactgatgatacggatacagtcaaatccttggaatggagg
gttgtcgccaacgaggatgagatcacgagatttgacacgaggctcaaagatctttctgtt
tccggcgactctctactggataaagtgatcgatcttagccatgacgtacgcaaaatcaaa
gaggtgaccggcgacaacggtgaacattttactcgtatcattcatgaaattgagaactgc
cagtcagacctttgtaagacggtgcaagatgacctgaggaagctcaagaacatcacgaac
catgccatggacaagtggcaaacagatgtgaactacataaagggcaaggtggattcgggt
tgctcggacgggtgcagcaccctgcaagaggaagtgaataaacttaaagaggatgtgcat
aaatgcaagatctgtttggagactccagcaggaccaggaacagaaccaggagacctggac
ggtcctcagaaacccctcgatggccacagtgtgatcagcaacaacgctaacctcggatcg
atccagggcgagttatcaggagtcattttaaccttcagctccatcaacgacactctgaaa
ggtttggagcacagcacccggaaacacgacagcgttatcaccgatctgggaaacacgaag
gacaagatcatctcagagctggataagatccagcaggaagtgacggagcacatcgaggac
agtaagatgcgcttcgacaacatcgaacgcgacctcaagcgttactttgtggagagaaca
ggcaacggcctcgacaagaggatcaccaaactggaaggggtttgtggtcgactcgattct
gtatctgagaacttgcagaaaatcaaagagggactcaacaagcacgtgaccggcctgtgg
agctgtgtaaacgggctcaacacgaccgtgatccaccacagcagcttcatcgacaccatg
gagaccacacatctggacaacatccacggaaagatcaagcagctcaactcctcaatactg
catcttctcaaggagttcaggagcctgatggaacacgacttcacaggtctgcctggaccc
ccgggtcctcagggagagacaggtgaaagaggatttccaggacatccaggactacctgga
ccacaaggaccacccggtaaaccgggtgtggaaggaccaagaggaccaccaggtctcagt
ggagaacgaggtttcccaggcgttgatgctaacgttcctaaggtctcgttctcggccgcg
ctcaccaagcaaatgacttcgtccggaaccatagtgtttgataaaatcttcgtgaataaa
ggaaacttttacgatccacaaacaggaatcttcaaggctcctcgggatggtcattacttc
ttcagcgccgttctgacgggccacaagaacgagaagatcgaagcggttctgtccaagtcg
aattacggtattgcgcgcgtggactcggccgggtatcagcccgagggcctggagaacaag
ccggtggcggagacgaagccgacgcccggatctctggccgtcttcaacatcatccttccg
ctgcagtcggacgacaccgtgtgtgtggacctggtgatggggaaactggcgcactcggtc
gaacctctcaccatgttcagcggcgctctgctctacgaggattactcataa
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integrated database retrieval system