Ictalurus punctatus (channel catfish): 108269971
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Entry
108269971 CDS
T04658
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00330
Arginine and proline metabolism
ipu00480
Glutathione metabolism
ipu01100
Metabolic pathways
ipu04148
Efferocytosis
Module
ipu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
108269971
09106 Metabolism of other amino acids
00480 Glutathione metabolism
108269971
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108269971
Enzymes [BR:
ipu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
108269971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
108269971
NCBI-ProteinID:
XP_017331656
Ensembl:
ENSIPUG00000008600
UniProt:
W5UFL6
LinkDB
All DBs
Position
9:complement(22225331..22230300)
Genome browser
AA seq
459 aa
AA seq
DB search
MTSFSDFEFTLLEEGFCARDIVEQKIRESTSSDDKDAFYVADLGDILKKHLRWARALPRV
KPFYAVKCNDGLAVVETLAMLGTGFDCASKTEIQLVQSLGVEPSRIIYANPCKQVSQIKY
ASAHGVQMMTFDSEVELMKVARSHDNAKLVLRIATDDSKAVCRLSVKFGATLKSSRLLLE
RAKELGLDIIGVSFHVGSGCTDPATYTQAIADARYVFDMGAELGYNMTLLDIGGGFPGSD
DSKLKFEEITSVINPALDKYFPVDCGVRIIAEPGRFYAASAYTLAVNIIAKKVNMKEQSG
SDDEDDGASDRTLMYYVNDGVYGSFNCILFDHAHVTPIVHKKPKPDEHMYPCSIWGPTCD
GLDRIVELCTLPDRQVGDWLLFENMGAYTVAASSTFNGFQKPDIYYVMSRSAWQRMQQIH
AQGMPALVEEQSPGNMPGHCGCGSTLELPAKPCATSVST
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttcagcgactttgaattcaccttactggaggaggggttctgtgcacgggac
atcgttgagcagaagatcagagagtccacctcatcggatgataaggatgctttctatgtg
gctgacctgggggatatccttaagaagcaccttagatgggcacgtgccttgcctcgtgtc
aagcctttctatgctgtgaaatgcaatgatggcctggctgttgtagagaccctggcaatg
ttgggaacaggctttgactgcgcaagcaagactgagatccagcttgtgcagtctctggga
gtggagcccagtaggatcatttatgccaacccctgcaagcaggtgtcgcagatcaagtat
gcttctgcacatggagtgcaaatgatgacctttgatagtgaagtggaactaatgaaggtt
gctcgtagtcatgacaatgccaaactagtgctgcgtatagctacagatgactctaaggca
gtgtgcagactgagtgtgaagtttggagccacgctgaaaagcagcaggctgcttctggag
cgggcaaaggagctgggcctggacatcattggagtcagttttcatgtaggcagcggctgc
actgacccagcaacatacacccaagccattgcagatgcacgatacgtgtttgacatgggg
gcggagttgggctacaatatgaccctgctggatataggcggtggcttccctggctctgat
gattccaagctgaagtttgaggagattacttctgtgatcaaccctgcactggataagtac
tttcctgtagactgtggtgtgaggataattgctgagcctggccgattctatgcagcttct
gcatatacgctagctgtcaatattattgctaaaaaagtcaacatgaaggagcagtctggc
tctgatgatgaagatgatggggccagtgaccgaactctaatgtactatgtcaatgatggt
gtttatgggtctttcaactgcatcctttttgatcatgcacatgtgacacccattgtgcac
aagaaacccaagcctgatgagcacatgtacccctgcagtatttggggtcctacctgcgat
ggcctggaccgcattgtggagctgtgcaccctgcctgaccggcaggtgggtgactggctg
ctatttgaaaacatgggtgcttacactgtggctgcctcgtccacctttaacggcttccaa
aaaccagacatctattatgtcatgtccagatcagcttggcaacgcatgcagcagatccat
gcccagggaatgccagctctggtggaggagcagagccctggaaatatgccaggccactgt
ggatgtggaagcaccttggagctgcctgctaagccctgtgccaccagtgtgtcaacatag
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