Ictalurus punctatus (channel catfish): 108269999
Help
Entry
108269999 CDS
T04658
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04310
Wnt signaling pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108269999 (psen1)
04330 Notch signaling pathway
108269999 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108269999 (psen1)
Peptidases and inhibitors [BR:
ipu01002
]
Aspartic peptidases
Family A22: presenilin family
108269999 (psen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
108269999
NCBI-ProteinID:
XP_017331712
Ensembl:
ENSIPUG00000009094
UniProt:
A0A2D0RMH4
LinkDB
All DBs
Position
9:22650503..22664667
Genome browser
AA seq
462 aa
AA seq
DB search
MADNAQDLVNNVSREGAEANQHTDTGRSTARPRRGVELNGQPPSTRAPQVVTDNEEEEDE
ELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQKDGQQLIYTPFREDTDTVGQRAV
NSILNATIMISVIVVMTLVLVLLYKYRCYKVIHAWLFFSSLLLLFFFSFVYLLEVFKTYN
VAMDYFTLAVIIWNFGVVGMICVHWKGPLRLQQAYLIMISALMSLVFIKYLPEWTAWLIL
AVISVYDLLAVLCPKGPLRILVETAQERNEPMFPGLIYSSTMVWLVGMADNGESRNNSSE
AAPKQEGDGLSMYPVVATAPVAQPEDDGGFTPDWVGQQEQRLGPLQSTDESRRHIQEMPS
ARPLPADDEEERGVKLGLGDFIFYSMLVGKASATASGDWNTTLACFVAILIGLCLTLLLL
AIFKKALPALPISITFGLIFYFATDNLVRPFMDQLAVHQFYI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgcacaagatttagtcaataatgtgtcacgtgaaggagcagaggccaac
cagcacacggacaccggcagatctacagcccggccacggagaggggtcgagctcaacggc
cagcctccttccactcgcgccccacaagtggtcaccgacaacgaggaagaggaggacgag
gagctcactctgaagtatggagccaaacacgtcattatgctcttcgtcccagtcacactg
tgcatggtggtcgttgtggcaaccatcaagtcggtcagcttctacacgcaaaaggatggc
cagcaacttatctacacccccttccgtgaagacacggacactgtgggccagcgtgcggtc
aattccatcctcaacgctaccatcatgatcagtgtgattgtggtgatgacgctggtactg
gtactgctctacaagtaccgctgctataaggtgatccacgcctggctgttcttctcctcc
ctgctcctgctcttctttttctcctttgtttacctgctggaggtgtttaagacgtacaac
gtggccatggactacttcacgctggcagtgatcatttggaattttggggtggtcggaatg
atctgtgtccactggaagggtccactgcgactgcagcaggcatacctcatcatgattagt
gccctcatgtccctagtgttcatcaagtacctgccagagtggactgcctggctcatcctg
gctgtcatctctgtctatgacctgttggctgtgttgtgccctaaaggacctcttcggatc
ctagttgaaacggctcaagaaaggaacgaaccgatgtttccagggctcatctactcttcg
actatggtgtggctggtcggcatggcagacaacggagaatcgaggaataactcttcagaa
gctgcccccaaacaagagggcgatggcctctcgatgtatcctgtagttgcaacggcgcca
gtggctcagccagaggatgatgggggtttcacgcctgattgggtcggccaacaagagcag
cgtctcggccctctgcagtccaccgatgaatcgagacgtcatatccaggagatgccatca
gcacgcccactgccagcagatgatgaggaggagaggggagtgaagctaggtcttggtgac
ttcatcttctatagtatgctggtgggaaaggcttcagctacagccagtggtgactggaac
acaacattagcctgctttgtggccattcttattggcttgtgtctaacactcttgcttttg
gccatctttaagaaagccctcccagctctccccatctccattacgtttggattgatcttc
tattttgccacagacaacctggtgcgcccgtttatggaccagttagctgtgcaccagttc
tacatatag
DBGET
integrated database retrieval system