Ictalurus punctatus (channel catfish): 108270059
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Entry
108270059 CDS
T04658
Name
(RefSeq) SH3 domain-containing YSC84-like protein 1
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270059
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108270059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
108270059
NCBI-ProteinID:
XP_017331836
Ensembl:
ENSIPUG00000021334
UniProt:
W5UCY0
LinkDB
All DBs
Position
9:12220601..12260705
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AA seq
334 aa
AA seq
DB search
MNSPIPSNLKSEAKKAAKILREFTEISNRQGPDKLIPAHVIAKAHGLAILSVIKAGFMIT
ARGGSGIVIARLPDGRWSAPTAIGIAGLGGGFEIGLEASDFVIILNQQRAVEAFSKGGNL
TFGGNFTVAVGPLGRNLEADVAFRSMAAVFSYCRSRGLYAGVSLVGSYLMERKETNRKFY
SQDIRASAILNGDVDPPPEASDLYAILQDYTEQYCSDWQSNYINPNRKSLAPYRPAPLTQ
RSASSFTPKAEEKKPGLYPSLSRSWGSQNSDEASGGTLVVTAMHAFTGQQPGDLSFAVGD
RITVITKTDSQYDWWEGELRGQVGIFPANFISLN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtccgattccatccaacctaaaatctgaagctaagaaggctgctaaaatcctc
cgggaattcactgagatttccaacagacaaggccctgacaaacttattccagcccatgtg
attgccaaagcacatggactggcaatcttatccgtcatcaaagcaggatttatgatcact
gctcgagggggaagtgggatagtgattgctcgtcttcctgatggaagatggtcagctccc
acagccattggcattgctggtcttggtggaggctttgagattgggctggaggcttctgac
tttgtcatcatcttgaatcagcaacgagctgtggaagcttttagcaaagggggaaacctc
acatttggagggaatttcactgtggctgttggtcctcttggcaggaatttggaggcggac
gtggctttccgcagcatggcggctgtcttctcctactgcaggtcacgtggcctctatgct
ggagtttcccttgttgggtcctacctgatggaacgtaaagagactaacagaaagttctat
tcccaagacattcgtgcatctgccattctcaatggcgatgtggatccacctccagaagcc
tctgacctgtatgctattttgcaagactacactgaacaatactgcagtgattggcagagc
aattatatcaatcctaataggaagagtctagccccatatagaccagcacccctaacccag
agatcagcttcttcctttactccaaaggctgaagaaaagaagccagggctctatcccagt
ttgtcccgcagctggggatctcaaaactcagacgaagcatcaggtggcactcttgtagtc
acggccatgcatgcattcactgggcaacagcctggtgatctgagctttgctgttggtgat
cgcatcaccgtcatcacaaagaccgactcgcagtatgactggtgggagggagagctgaga
ggacaggtgggcatttttcctgccaacttcatttcccttaactga
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