KEGG   Ictalurus punctatus (channel catfish): 108270067
Entry
108270067         CDS       T04658                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108270067
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108270067
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 108270067
NCBI-ProteinID: XP_017331858
Ensembl: ENSIPUG00000015158
UniProt: W5U7U3
LinkDB
Position
1:complement(20738421..20756917)
AA seq 605 aa
MQPACQHGTSELQLKVDFFRKLGYSPQEVQSVLLKLGLDTDTNAVLGELVRSGARESPTT
SQESDDGSSGFSHHGGGGSRSKDLQKDIQCSPAVDEIDSDLKPIVIDGSNVAMSHGNKEV
FSCRGIELAVNYFLERGHRNITVFVPSWRKEQPRPDVLISDQHILAELERRKIVVFTPSR
RVGGKRVVCYDDRFIVKLAYDLDGIIVSNDTYRDLQSERLEWKRCIEERLLMYSFVNDKF
MPPDDPLGRHGPNLDNFLRKKPLLPDTKRQHCPYGKKCTYGIKCKFYHPERTSQSQRSLA
DELRDNARLSSSVHCCSKESRRSGASLRGPCHTESGFSSYFPSLEQELEYKLSLESAVCV
TRNQLSESMQHYWDDVPTKYQACKPASHTPLDWHSLYSTYLTNPSSSSDSGLGSYESQFS
EASQGHDDSCRISSRHNNRFYEQQDAPFVCTCSSESVVQPSIHQYPHSHHPPNGFDYGAL
QFRRPSSNRAYSLPNYMQPNELHHSQPKAGPDTVWLPQTRTAFSLPNPRHAIGPHRPADI
YGSSQGVLSLNTVPFEAEREETRKKLHAIFNPHLVDKVMGMFPKLKDAQQLAAEILKLKS
KGELF
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgcagcctgcttgccagcatggcacctccgagctccagctgaaagtggactttttccgc
aagctgggctattcaccacaagaggtacagtcggtgctgctgaaactaggcttggacacg
gacacgaatgctgtactgggggagctggtgcgttctggagccagagagtcacccacaacg
agtcaggagagtgatgatggaagctctggatttagccaccacggaggaggtggatccaga
agtaaagatctccaaaaggacattcaatgctcaccagcagtagatgaaattgacagtgac
ctaaaacccattgtgattgatggaagcaatgtggctatgagtcatggaaacaaggaagtt
ttttcatgtcgtggaattgagctggcagttaactacttccttgagagaggacacaggaac
atcacagtttttgtgccctcatggcgaaaagagcaaccaaggccagatgtcctcatttca
gatcagcatattctagcagagctggaaaggagaaagatagttgttttcacaccctcccgg
cgggtaggaggtaagcgagtggtctgctatgatgatcgcttcatcgtcaaacttgcctat
gatctggatggcattattgtgtccaatgacacctaccgtgaccttcagagtgagcggctt
gaatggaagcgctgtattgaggagaggctactcatgtactcctttgtcaatgacaagttc
atgccaccagatgacccacttggtcgtcatggcccaaacttggataattttctcagaaag
aaacctctgctaccagacaccaaacgccagcattgtccttatggaaagaaatgcacatat
ggaatcaaatgcaaattttatcaccctgagcgaaccagccagtcacagcgttcccttgca
gatgaactgagggacaatgctcgcctgtccagttctgtccactgctgttcaaaggagagc
cgaagatcaggagcttcccttagagggccctgccacactgagtctggtttcagttcatac
tttccatctttagagcaagagctggagtacaagctatccctggaatctgctgtttgtgtg
acaagaaaccaactcagtgaaagcatgcagcactactgggatgatgttcctacaaagtac
caggcctgcaagccagctagccacactcctctggactggcatagtctgtactccacatac
cttactaatccttcatctagctcagattctggacttggctcctatgagagccagttttca
gaggcatctcaaggacatgatgattcatgtaggattagctctaggcataacaacaggttt
tatgagcaacaggatgcaccttttgtttgcacttgctcttctgagtcagttgtccaacca
agcatccatcagtaccctcattcccatcatccacccaatggctttgattatggtgcactg
cagttccgtagaccctctagcaatcgagcctacagccttcccaattacatgcagcctaat
gagctccatcacagccaaccaaaagctggtcctgacacagtgtggctccctcagactcgc
acagcttttagtttacccaaccctcgtcatgctattggaccccacagacctgctgacatt
tatgggagcagccagggagtgctcagtctaaacactgttccatttgaggcagagcgagaa
gagacgaggaagaaactccatgcaatttttaatccccatcttgtggataaggttatggga
atgttcccaaagctaaaagatgcccaacaacttgcagcagagattctcaagctcaagtcc
aaaggcgagttgttctaa

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