KEGG   Ictalurus punctatus (channel catfish): 108270068
Entry
108270068         CDS       T04658                                 
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108270068 (stxbp5b)
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108270068 (stxbp5b)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108270068 (stxbp5b)
SSDB
Motif
Pfam: LLGL WDR55 Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_HPS5 Beta-prop_IFT140_1st WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Lgl_C Beta-prop_NUP159_NUP214 EIF3I Beta-prop_VPS8 Synaptobrevin WD40_like
Other DBs
NCBI-GeneID: 108270068
NCBI-ProteinID: XP_017331854
Ensembl: ENSIPUG00000003076
UniProt: A0A2D0RMW1
LinkDB
Position
9:18905866..18938854
AA seq 1188 aa
MKKFNIRKVLDGLTAASSSSSSSASTQPGNRENDIIQETLQSEHFQLCKTVRHGFPYQPS
AMAFDPVQKILAIGTQTGALRLFGRAGVECYCQHESGSAVIQLQFLINEGALVSGLADDS
IHLWNLRQKIPAVLHSLKFTRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVI
MWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNIRSPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYK
TTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDYQE
PYAVVALLEKDLVVIDLAQTGYPIFENPYPLTIHESPVTCCEYFADCPDELIPALYSVGS
RQKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSVKFWDASALMLQVLYKLKTAKV
FEKARNKEEKPSTDIVDEDPFAIQSLSWCPESRMLCVAGVSAHVVVYRFSKQEITTEEVP
LLEVRMQCELNDVETPDGGGDHASAVSTPGASSSPLSSAPQTHLSSSSNNSTDGLRDNVP
CLKVRSTPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNGNGLVVVDYL
QKTLLLNVSTAELYGSSDPHQRQPRSPRKARQPSGGLCDGHDASTALEDRCKSPTSGCIS
SDSHCHSDDDSKQNFFERVKSKSRLLSKSVANDLAKMSWKFSLAADQKQDGTIQRQCSLP
NKKRVFHEKEEVSRRKATSIYRTHSVPDSNAKDNSFSRSRSSSVTSIDKESREVISSLHF
CDSLSRKSDVAAAPSLWVGTSVGTMLGISFNVPSTPEQRLQQTVGVSFCGSLIRLKGGIL
RMALMDSSGSLQPPASECWYDLNAPEEEREKTRRRRPASPPSSQENQDTHYAVVCSEKQA
KVVALPSQNCIFEHNITETSYVLRADVVVMPAGICFACFCANGHIMTLSLPSLRPLLDVN
YLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNLQEMLGELFTPVETPEAP
NRGFFKGLFGGGAQSLDREDLFGELAAGKASRSLAQHIPGPGGMEGMKGAASGVVGELAR
ARIALDERGQKLGELDERTAAMMASADSFSKHAHDVMLKYKDKKWYQL
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatatcagaaaggtgctggacggcttgactgcggcttcctcctcctct
tcctcatccgcatcaactcagccgggtaacagggaaaacgacatcattcaggagactctg
cagtccgagcattttcagctctgcaagacagtgcgacatggctttccttatcaaccctca
gccatggcttttgaccctgtgcaaaaaatactggcgatcgggacacagactggagcatta
agactctttggccgtgccggtgtggagtgttactgccagcatgagagtggctcggctgtc
atccagctgcagtttctcatcaatgagggggcgctagtcagtggtttggctgatgacagc
attcatttatggaatctgaggcaaaaaattccagctgttctccactctcttaaattcacc
agggagaggatcacgttttgccatttgcccttccagagtaaatggctttatatcggaaca
gaacgggggaacattcatattgtcaatgtggagtccttcactctctcaggctatgtcatc
atgtggaacaaagccattgaactctcttcaaaaacccaccctggtcctgtggtgcacatc
agtgataatcctatggatgagggaaagcttttaattggttttgaatgtggtattgttgta
ctatgggacttgaaatcaaagaaagctgactaccgctacagctatgatgaggcgatccac
tcagtggcctggcaccatgaagggaaacagtttgtgtgcagtcattcagatggtactctt
accacatggaatatacgttctcctgccaagccggcacagatcattacaccacatggcaag
cagcctaaggatggaaaaaagccagagccatgcaaacccattttgaaagtggaatacaaa
acaaccagagctggggatcctttcatggtgctgtctggaggtctttcatatgatacagtg
ggacgcagagcctgtctgactgtaatgcacggaaaaagtactgctgtactggagatggac
tatcccattgtggatttcctaactctgtgtgaaactccttacccgaatgattatcaagag
ccttatgcagtagtggcgctgctggagaaggatttagtagttattgacctcgcacaaact
gggtaccctatctttgaaaacccatatcctctgactatccacgagtccccagtgacctgc
tgtgaatactttgccgactgtcctgatgaacttatccctgcactttactctgtgggatcc
aggcaaaagagacagggctacagtaaaaaggagtggcctataagtggtggtaattggggc
cagggcacacaaagctatccagagatcattatcacaggacacgctgatggatcagtcaaa
ttttgggatgcttctgcattaatgctgcaggtgttgtacaagctgaaaacagccaaggtg
tttgaaaaagcccgtaacaaggaggagaagcccagtactgacatagtggatgaagaccct
tttgccatccagagtctgtcctggtgcccggagagccgcatgctgtgtgtggctggagtc
tctgctcacgtcgttgtttaccggttcagcaaacaggaaataaccacagaggaggttccg
ctgttggaggtgcggatgcaatgtgagctgaatgatgttgaaacgccggatggtggcggg
gaccacgcatcggctgtatccacaccaggagcttcatccagccctctgtccagtgcacca
caaacacacctatcctccagcagcaacaactccactgatggcctgcgtgataacgtgccc
tgcctcaaggtgaggagcactccgctcaagcagtctccaggctaccaggtggaactggtc
attcagttggtgtgggtgagtggggagccaccacagcagatcaccagcctggctgtcaac
tctgcatacggcctagtggtttttggtaatggtaatggcctggtggtggtggattatctt
cagaagacgctgctgctcaatgtgagcacagcagaactgtacggctcctctgatccccac
cagagacagccacgctcaccccgcaaagccagacaaccctctggaggtctctgtgatggc
catgacgcttctactgccttagaagatcggtgcaaatctcctacatcaggctgcataagc
tctgactcccactgccattctgatgatgacagcaaacaaaatttctttgaaagggtgaag
tcgaaaagcagactgttatcaaagagtgttgccaatgaccttgctaagatgtcatggaaa
tttagcttggctgctgatcagaaacaagatgggactatacagcgccagtgctctctccct
aataagaaacgtgtgtttcatgagaaggaagaagtgtccagaagaaaagcaacatctatt
tacaggactcactctgtgcctgattccaatgccaaggacaattcctttagccgctcgcgc
agctccagcgtgaccagtattgacaaagaatcacgtgaggtcatctcgtctttgcatttt
tgcgactccctatccaggaagagtgatgtggcagcagcccccagtctttgggtgggcacc
tctgtgggcactatgctgggtatctccttcaatgtgccctccacccctgagcagaggctg
caacaaacagtaggcgtctccttctgtggctccttaattcggttgaaaggaggcattttg
cgcatggcattgatggactcaagtggctctctacagcctcctgcctctgagtgctggtat
gacctcaacgcccctgaggaggagagggaaaagacacgccggcgccggcctgcctcaccc
ccttcttctcaggagaaccaagacacccactacgctgtggtctgttctgagaaacaggcc
aaagtggtggccctgccctcacagaactgcatctttgaacacaacatcactgaaacctcg
tacgtgctgagggccgacgttgtggtcatgcctgctggcatctgcttcgcctgcttctgt
gccaacgggcatatcatgactctgagtttgcccagtctgcggccgctattagatgtgaac
tatctgcctctgacggacatgcggatagcccgaaccttctgcttctccaacctaggccag
gctctgtatctcacctcccctacagagatccagagaatcacctacagtcaggaaacctgt
gacaacttacaggaaatgctgggagagctattcactccagtcgagacaccagaggctcca
aacagaggcttttttaaaggtctttttggaggcggtgcccaatccctggatagagaggat
ctctttggagaattggcagcagggaaggcctcacgcagccttgcccagcacattccagga
ccaggtggcatggagggcatgaagggggcagcatcaggagtggtgggggagctggcacgt
gcccgcatagctctagatgagagaggacagaagctcggtgagctggatgagaggacggca
gccatgatggccagcgcagactcattttccaagcatgcacacgatgtgatgttaaagtac
aaggataagaagtggtatcagctctga

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