Ictalurus punctatus (channel catfish): 108270070
Help
Entry
108270070 CDS
T04658
Name
(RefSeq) HEAT repeat-containing protein 5A isoform X1
KO
K24814
HEAT repeat-containing protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270070
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
108270070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
TOR1L1_N
HEAT
Vac14_Fab1_bd
HTH_NDX
UTP20_C
Motif
Other DBs
NCBI-GeneID:
108270070
NCBI-ProteinID:
XP_017331863
Ensembl:
ENSIPUG00000017162
UniProt:
W5U9Z7
LinkDB
All DBs
Position
9:7883726..7976810
Genome browser
AA seq
2042 aa
AA seq
DB search
MEQAHSLLLNEDVCSVLGEQQRAEFVFKWLRFLKKLLPAAERNQQKKIHFDALWVDVKQN
QKRLVEQLMAVLTSSPGPSTRYLLAHCVALVYRVGESLTSSLTVDRCHDIIKSKDDSPSF
LPTRLAAVACLGAMYEQLGRLLISSFKETVANLLKAMKSSESQGRYEIMLCIEKILKGLG
VSAMPCHRDIYKATRSCLTDRSMTVRCAAAKCLLELQREAVFLWSTELENIASLCFRAFD
GSNCDVRVTVSKLLGTLLASALEPKQAIAAPRSSLKYSRLEEVTELLSSGFLRRGAGFLR
VSGDMLKGTSSVNGDLRVGITQACVVFISTLGGAWLEAHFSSLLSLLMELVCDPRVSQNL
AEAVCCRRCVSYILRASVGSLLGEKAQIVVAKELCLAINKQKKAADAGGDMEMQVRSTAV
AASQHMLVCVLLELGSVLQDLGSTATPLLHDTSIGMLDTVISVLLHPSLSARLAAAWCLR
CIAVALPAQLVVLLNRCSERLNSLKSCPEAVAGYSAAIAALLGAVQQCPLGIPYSKGKVV
MGLAEDLLRSAAQNSKISIQRTQGGWLLLSALNTLGPTVVKHHLPRMLLLWKCAFPQSVK
ELESELRRGDSFTWQVALEGRAGALFAMKNLVIHCRDHLSDDVIGRLLPLLSCAMALLTL
LPSLKKSYGKQIKNAVYVFQMRLYEVLALLPPKTYEESFDTVLKQLVNDLTDPENTTCAE
DSLLRPLCHGPDLSLLGPALPDMDQDYIEEQLRGGRMGEGTLEYDPFTICEKSQEAPTPL
PPADALTLQSVQLFGVIFFHLAVHQRVQILEQFCECVKQLKGTRQQMVQIHVTAAFCNSL
KCLALGHVKLGPEEVQKPALSILLGALESSNPLLRCVAAEGFARFAQVLSDHSVTVSLSL
MSFDKLKAAREAVLRTGHALLLGALYRYQGGISSAKHLSACVGVLFTLSQDGSSPEVQMC
SLHSLAMVVDQAGPLYHSHMEASLTLILHLLLTTPHTHVEVQQSLGRCLSALITSLGPDL
QGEGVGMCAVRSLCLLACAIMQDSTDCLVQAQAIACLQHLHMFSPRHIDLASLVPSLCGI
LLDYSVLVNLCSSYLYLRRAVVACLRQLAQREAVEVSEHAVALVKELPRRDNTQLDVTIK
EVGLEGALFSLLDQERDAQLCQDIEETLVHMMSSVAESQLAHWLKLCKDVLSSACSDSVI
AAPVELNQEEDADSYDDASFFHAKCVYVGPFNNLRWSSRVFAVKCVCHIIVQCENGHPAH
FDMTLAQEQCLHKSTDFLVLHLADLVRMAFMAATDHSKQLRLAGLHMLLLIIRKFAGVPE
PEFPGHVILEQYQANVGAALRPAFCADTPPDVTAKACQVCSAWMASGVVSDLRDLKRVYQ
LLVSSLVKVQAGRDVPNPLYNESTLTMETLAVLKAWAEVYIMAVESSRHREQQDPADEGE
AAGLLKLVQGELGTLSCLWLAALQDHALLTLPPDYAKQLPSTGGSFYTAEALEQARQHYC
STWAPILHATALWLNSSEFIMADEGPANLSRPVTPTSMGQSSTLDSAKSQEDISVERLYL
ILGISVEFLCSPHSQNQMENIISCLHALQALLEVPWLRSKVGNDQALSVELLSVLHRMIV
TRESPKIQLAVLELVQQVVCATQEHVKEKRHSAEVDDGAAEKETVPEFGEGRDTGGLVPG
KSLVFGALQLCLCTLLRKLPQLSPRLAGSPSGQGGIVSSLSDGDCTLITSALEILSELPS
ICSPEGSVSVLPTVLYLLLGVLRELASEYGGVGTETLVPGTLQALRTVLSSPMSRVEKSR
RAWVQALRSALTTLLMCWNTDTTESGVDEVTLLTALTIFLLCASVEVTNVEPLKTCCLRK
FQASLESKDPMVLSRCYQLLASVFQGPAVVAESFIRGLGTQLVARLQQVEKNRPQTAIEL
QAVQDGVRAMESIVLAAQETHRDQLVAVLLPILVSFLLDENTLATAPEASCSLHESALQD
LMRLGPQHPAVFKAFMASAPHMKARLEAAIKGNQEIVSAKARPTRVPSKSQVPSIKLKTN
FL
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcacacagcctgctgctgaatgaggatgtctgcagcgtactgggtgagcag
cagagggccgaatttgtcttcaagtggctacgctttctgaagaagctgctgcctgctgct
gaacggaaccaacaaaagaaaatccattttgatgcattatgggtggacgtgaagcagaac
cagaagcggctggtggagcagctcatggctgttctgaccagttctcctggcccctctacg
cgctacctcttagctcactgtgtggctctggtctatcgtgtgggcgaatcgcttacctcc
agcctcactgtggaccgctgccatgacatcatcaagagcaaggatgactcgcccagcttc
ctgcccactcgcctggcagctgtggcctgtctgggtgcgatgtatgagcagcttggccgt
cttctcatcagttcctttaaggagacagtggcaaatcttctgaaagccatgaagagctct
gagtcacaggggcgttacgagatcatgctgtgtatagagaagatcctgaagggtctgggg
gtgagtgcaatgccttgtcacagagacatctacaaagccacacgctcctgcctcactgac
cgctccatgacagttcgctgtgctgccgctaagtgcctgttggaactgcagagagaagct
gttttcctgtggtccacagagttggagaacatagcctcattgtgcttcagagcatttgat
ggctccaactgtgatgtgcgtgtcaccgtctccaaactgctgggcaccttgttagcttca
gcacttgaacccaaacaagccatagcagctccccggtcaagtttgaagtatagtcgtttg
gaagaagtgacagaactgttgtccagtggcttcctacgacgtggagcaggtttcctgcgt
gtcagtggtgacatgctgaagggtaccagctcagtgaatggagacttgcgcgtgggcatc
acacaggcatgtgtggtgtttatctccactctgggtggggcatggttggaagcacatttc
tcttccctgctttctctgctcatggaactggtgtgtgacccaagggtcagtcagaacctg
gctgaagctgtctgttgccgacgctgtgtgtcttacatcctgagagcctctgtaggcagc
ctactgggagagaaagctcagatagtggtggccaaggagctctgcctggccatcaacaaa
cagaagaaggctgcagatgcaggaggggacatggagatgcaagtcagaagcacagctgtg
gcagccagtcagcacatgctggtgtgtgtcctgctggaactgggcagtgtgttacaagac
ctcgggtccactgctacaccactgctgcacgacaccagcataggaatgttggatactgtg
atctctgtgctccttcaccccagcttatctgcacggctggcagctgcctggtgcctgcgc
tgcatagccgttgcgctgcctgctcagctggttgtattgctcaaccgctgttcagagaga
cttaattcgttgaagtcttgccctgaggccgtagccgggtatagtgctgcaattgctgcc
ctgttgggtgctgtacaacagtgcccactgggaataccatactctaaaggcaaggtggtg
atgggcctggctgaagatttattgcgctctgctgcccagaatagtaaaatctccatccag
cgaactcagggaggctggctactactcagcgcactcaacaccttgggtcccactgtagtg
aagcatcaccttcctagaatgctgctgctgtggaaatgtgcttttcctcagtctgttaag
gagctggagagtgaacttaggcgtggagactcctttacgtggcaggtggcactggagggc
cgtgcaggagcactgtttgcaatgaagaatctggtgattcactgcagagatcacctcagt
gatgatgtcattggtcgactgctgcctctcctctcatgtgctatggccctgctgactctg
ttgccttctctaaagaaatcctatgggaaacagataaaaaatgctgtgtatgttttccaa
atgagactgtatgaagtccttgcactgttgccacctaaaacctatgaagagagttttgac
actgtgttgaaacaactggtgaatgacctcacggatccagagaacacaacgtgtgctgag
gacagcctgctgcggccgctgtgccacggaccagacctttctttgctgggtccggctctg
cctgacatggaccaggactacatcgaggagcagctacgtggaggcaggatgggagaagga
acattagagtatgaccctttcaccatatgtgagaaatctcaggaggcacccacacccctt
cccccagctgatgctctcacccttcagtcagtccagctatttggagtaatttttttccat
ttggcggtccatcagagagttcaaatcttggagcagttctgtgagtgtgtgaagcagctg
aagggcacacgacaacagatggtccaaatccatgtaacagctgctttttgcaacagtctg
aagtgtttggcattgggtcatgtaaaacttggtccagaggaggtgcagaagcccgcactc
tctatcctattgggagcgctggagagctctaaccctctacttcgctgtgtagctgctgag
ggtttcgcccgattcgcacaggttctcagtgaccacagtgtaacagtctccctcagcctg
atgagctttgataaactgaaggcagcaagggaggctgtcttgcggaccggacatgccctg
ttgctgggggcactctatcgctaccagggaggcattagttcagccaaacacctcagtgct
tgtgtaggggttcttttcacactctcacaggacggcagctcaccagaggtccagatgtgc
tctctccattctttggccatggtagtggaccaggctggacctctgtaccatagtcacatg
gaggccagcttgactctaattttgcatttgcttctcaccacaccacacactcatgtggag
gtgcagcagagtctggggcgctgcctcagtgcgctcatcacatcactgggtcctgacctg
caaggtgagggtgtgggtatgtgtgcagtgaggagcttgtgtttgctggcctgtgctata
atgcaggacagtacagactgcctggtgcaggctcaggccattgcatgcctccaacacttg
catatgttctcaccccggcacatcgacctggccagtctggtacccagcctctgtgggatc
ttgttggattattctgttttggtgaacctgtgcagctcgtacctgtatctacgcagggca
gtagtagcatgtttgcgtcagttagcccagcgggaggcagtggaggtgtctgagcatgct
gtggccctggtcaaggaactgccacgaagagacaacacacagttggatgtgaccattaag
gaggtgggcctggagggagctttgtttagcctgttggatcaagagcgggatgcccaactc
tgccaagacattgaagagacacttgtccatatgatgagctcagttgctgagagccagctg
gctcactggctcaagctctgcaaggatgtactctcctctgcctgttcagactcagtaatt
gctgcacctgtggagttgaatcaggaagaggatgcagacagctatgatgacgcatcattc
tttcatgccaagtgtgtatacgttgggcccttcaacaacttgcgctggtccagccgtgta
tttgctgtcaagtgtgtgtgccacatcatagtgcagtgtgagaacggacacccggctcac
tttgacatgacactggctcaagaacagtgtttacataagtccacagatttcctggttctt
cacttggctgatctggtgcgcatggcctttatggcagcaacagatcatagcaaacagctc
cggctggccggcttacacatgctgctgctcatcatccgcaagtttgccggtgtcccagaa
cctgagttccctggccacgtcattctggagcagtatcaggccaacgtgggagctgctcta
aggccagccttttgtgcagacactcctcctgatgtcactgccaaagcctgtcaggtgtgc
agtgcatggatggctagcggggttgtcagcgacctccgtgacctcaagagggtttaccag
ctattggtgtcttcgctagttaaagttcaggcagggagggatgtgcctaatcccctctac
aatgagagcaccttaaccatggagacactggctgtgctcaaagcctgggcagaggtgtat
atcatggcagtggaaagcagcaggcatagagagcagcaggaccctgctgatgaaggtgaa
gctgcagggctgctaaaactggttcagggtgagctgggcacactgagctgcctgtggctg
gcggcactgcaggaccacgcactgctcacactgcctccagactatgccaagcagctaccc
tccacaggtggctcgttctacacagcagaagcactggagcaggcacgtcagcattactgc
agcacctgggctccaatcctccatgccacagcactctggctcaacagcagtgagtttatc
atggctgatgaggggccggccaacctctccagaccagtcacccccacctcaatgggccag
tcctccactctggacagcgcaaagtcccaagaggacatcagtgtggaacgtctctaccta
atccttggcatcagtgtggagtttctgtgctcacctcactctcagaatcaaatggaaaac
atcatctcatgtcttcacgcactgcaagctttacttgaagtgccttggctccgttccaaa
gtgggcaatgatcaggcactgagtgtggagctcctcagtgtgctgcacaggatgattgtg
acccgagagtctccaaagatccagctggccgtgttggaattggtgcagcaagtggtgtgt
gccactcaggagcatgtaaaagagaaacgccacagcgctgaggtggatgatggtgcagct
gagaaggaaaccgtgccggagtttggtgagggacgggacactggcggcctggttccggga
aagtctttggtgtttggagcactgcagctgtgtctttgcacactactccggaaacttcca
cagctcagtcctagactagcaggcagtcccagtggacagggaggtatagtctcctcccta
agtgacggcgactgcactctgatcacctcagctttagagatcctctccgaattgccctcc
atctgctctcctgagggcagtgtctcagtgttgcctacagtgctctatctgttacttggg
gtgctgcgggagttggcaagtgaatatggaggagtgggcacagagacactggtgcctggg
acacttcaagcactacgcacggtcctctcatctcccatgagcagagtggagaaaagccgc
cgtgcctgggtccaggcattacgctctgctctcacgacactgcttatgtgctggaacacg
gacacaacagaatctggtgtggatgaggtcactttgctgacagcactcaccatcttcctg
ctttgtgccagtgttgaggttaccaatgtagagccgctaaagacatgctgcctcagaaag
ttccaggccagcctggagtccaaggaccccatggtgctgagccggtgttaccagttactg
gcgtcagtgtttcagggcccagcagtggtggcagagtcatttatcaggggactaggcact
cagctggtggctcggctgcagcaggtggagaaaaaccggcctcagactgccattgagctg
caggcagtgcaagatggtgtcagagccatggagtcaatagtgctcgctgctcaggaaact
caccgtgaccagttggtggctgtgctgttgcccatcctagtctccttcctgctggatgaa
aacactctggccacagctcctgaagcctcatgttctctgcatgagtccgctctgcaagac
ctgatgcgcctcggccctcagcatccagctgtttttaaagccttcatggcctcggcacca
cacatgaaggcccgacttgaggcagccatcaagggcaaccaagagattgtaagcgccaag
gccaggccgactcgggtgcccagcaagagccaggtgcccagcatcaaactgaagaccaac
tttctgtga
DBGET
integrated database retrieval system
