Ictalurus punctatus (channel catfish): 108270080
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Entry
108270080 CDS
T04658
Name
(RefSeq) prolactin regulatory element-binding protein
KO
K14003
prolactin regulatory element-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108270080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270080
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108270080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
108270080
NCBI-ProteinID:
XP_017331896
Ensembl:
ENSIPUG00000017324
UniProt:
A0A2D0RPN1
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Position
1:complement(23246844..23255515)
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AA seq
429 aa
AA seq
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MGKRKVPDLYRAPFPLYTVKVDPKTGLIITAGGGGASKTGIKNAVQFLGLELVGSQHSAT
LLHSHDTGSCATMNMALGGDVIAAGQDGNCRVMRFRQQGPKEGRSAALKDGSGDQGSARR
RGAKSQNGGGGGDAAGGGDPQTKDRSVQILVDKVGKVQSDLSPQDPLQKCVRFSSDLKLL
LTGGADGYVRAWEYPSLKEKLNFKAHQDEVEDIDISPDNKRIVTAGRDFACSVWSDDQLM
LGLRWHDHMPHITEKMYRYQSCRFAKVEDQKDALRLYTVQIPHKRERKPPPCYLTKWDGR
TFLPLLIKPCGNEVISCLSVSDSGTFLGLGTVTGSVSIYIAFSLQRLYYVQESHGIVVTD
LAFLPDAPKSKPVKGNNEVAMLSVAVDSRCQLHTMANRRSVPIWLVLFLCIALLVGVILL
LQHFFPGFI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacgaaaagtgccggatttgtatcgtgcccctttccctctctacactgttaaa
gtcgatccgaaaactggactcatcattactgctggagggggcggagcatccaagaccggc
attaagaatgcagtgcaattccttggtttagagctagtgggaagccaacacagtgccact
ctgctgcactctcatgacacaggatcatgtgccactatgaacatggcactgggaggagat
gtgatcgctgctggacaagatggcaactgcagagtgatgcgcttcagacaacaaggtcct
aaagagggacgatcagctgctctaaaggatggatctggggaccagggaagtgccaggagg
agaggggcaaaaagccagaatggtggtggtggtggtgatgctgctggtggtggggatccc
cagacgaaggacaggtctgtgcagatattagtagacaaagttggaaaggtgcagtcagac
ctcagccctcaggacccgctgcagaagtgtgtgcgcttcagctctgacctgaagctgctt
cttacaggaggagccgacggttatgtgagagcgtgggagtatccctccttgaaagagaag
ttgaacttcaaagctcaccaagatgaagtagaagatatagacatcagccctgataacaag
cgcatcgtcacagcagggcgagattttgcatgtagtgtatggagtgatgatcagctcatg
ctgggtttacgttggcatgaccacatgccccatattacagagaagatgtatcgctaccag
tcctgtcggtttgctaaggtcgaggaccaaaaagatgcattaagactgtacacggtccag
attccacacaaacgagagcgtaaaccaccaccatgctacctcacaaaatgggatggcagg
accttcttgcccttgctaattaagccatgtggcaatgaagtgatatcctgtttgagtgtg
agtgactctggaacctttcttggcctcggtacagtcacaggatcagtatccatctatatc
gcattctcactgcagaggctgtactatgtacaggaatcccacggcattgtggtgacagac
ctagcgttcttgcctgatgcccccaaaagcaaacctgtaaagggaaataatgaagtagcc
atgctgagtgtggctgtagacagtcgctgtcagttgcataccatggccaaccggagatct
gttccgatatggctggtgttgttcctgtgtattgctctgcttgtgggtgtcatcctgctc
ctgcagcatttcttcccagggttcatttaa
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