KEGG   Ictalurus punctatus (channel catfish): 108270107
Entry
108270107         CDS       T04658                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108270107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    108270107
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108270107
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108270107
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     108270107
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 TPR_2
Other DBs
NCBI-GeneID: 108270107
NCBI-ProteinID: XP_017331937
Ensembl: ENSIPUG00000018328
UniProt: A0A2D0RN53
LinkDB
Position
9:31772324..31783049
AA seq 769 aa
MGIQGLLQFLKEASEPVHVQKYRGLTVAVDTYCWLHKGAFSCAERLAKGEPTDQYVSFCM
KFVDMLLSHGVKPVLVFDGRNLPSKQEVEKARRERRQANLQKGKQLLREGKVAEARECFT
RCVNVTPAMAHQVIKAARGRGVDCLVAPYEADAQLAFLNKSGIAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEISQDHLGRCRSLGDVFTEEKFRYMCILSGCDYLPSIYGIGLGKACK
LLRMANNPDILTVIRKIGHYLKMNITVPDEYIDGFVKANNTFLYQLVFDPINRKVVPLNP
YPENLELSTLSYAGVNVGDKQGLQMALGNLDINTMEKIDDFNPDAPVTRPVKAPRSRGWG
DPAPVTASPRVSIWSRGYVPSSVQPQTPSSPQRPPQTRGKEGVMSLRGLKLPNREPQVKR
PRDSAVSDEDVLEQYLSGTKKQRIVTVETKHIVPKETKPSQREPPRPRNRFAKLLQWRNQ
SEEGDGEQGTRSRFFASSDLSVSESNESKEESDDFEKSDHAPSLAVETLGAETETPPRRA
SLSAFSWSGSSSSTELSRPGSATSDRTRTPSMPSGLSVLQQFQRKKENLSWGQTESPQRS
TPCSPTEGAVDTETPPDSPPSQDSAYFSQPNSSHSAAEDSTTGTQSVTTSPETEKDTWRD
SGCSVSLGEVSVTEEVRSTPTRTKVSGLSRISPSEQEKGSKIRPCAPARASGLRKKAPGK
KMAVTNENSPGLQATISGLWKNFSFNRENPKLNPCKKGKPMSPVKDNVQ
NT seq 2310 nt   +upstreamnt  +downstreamnt
atggggattcaggggctgctgcagttcctaaaggaggcttcagaaccggttcatgtgcag
aaataccgcggactcactgtggctgtagacacctactgctggctgcacaaaggagctttc
tcctgcgccgagagactggctaaaggagaacccactgaccagtacgtgtcgttctgtatg
aagttcgtggacatgctcctgtcccacggcgttaaaccggtgctggtgttcgacggacga
aaccttccatcaaaacaggaagtggagaaagctcggcgagagcgtcgtcaggccaatctg
cagaaaggtaagcagctgctgcgagaggggaaagttgccgaggctcgagaatgtttcacc
cgctgtgttaacgtcacacctgccatggcacaccaagtcatcaaggctgcgagagggcgt
ggtgtggactgtctggtggccccgtatgaagccgatgctcagttggcgttcctgaataaa
tcgggaatcgctcaggccgtcatcacagaggactcggacctgctggcattcggctgtaag
aaggtgatattgaagatggataagcaggggaacggtctggagatatctcaggatcacctg
ggccgctgccgctcgctgggagacgtcttcactgaggagaagttccgctacatgtgcatc
ctgtcggggtgtgattaccttccatccatctacggcatcggcctggggaaagcctgcaag
ctgctcaggatggccaacaatcccgatatcctcacggtgatcaggaagatcggtcattac
ctgaagatgaacatcaccgtacctgacgagtacatcgacggctttgtgaaggccaacaac
acgttcctctatcagctcgtcttcgaccccatcaacagaaaagtagtgcctcttaaccct
tacccagaaaaccttgagctcagcacgctcagctacgccggagtgaacgtcggtgataag
caagggctgcagatggctctgggcaacctggacattaacaccatggagaagatcgacgat
tttaatcctgatgctcctgtaacacgacctgttaaagcccctcgcagtcgaggctggggc
gaccctgcaccggtcaccgcctcgcctcgagtcagcatctggagcagaggttatgtaccc
agcagcgttcaaccccagactccatcgtcccctcagagacctcctcaaacccgaggcaag
gagggagtcatgtccctgcgtggtctcaaactgcccaacagagaaccacaggtcaagaga
ccccgagactccgctgtctcagacgaggacgtgctggaacagtacttatctggtacgaag
aaacagcgcatagtaaccgtggaaacaaagcacatcgttcccaaggagacgaaaccttcc
caaagagagcctcctcgaccccggaaccgatttgccaaactgctgcagtggaggaaccag
tcagaggagggcgatggagaacagggaacacgcagcaggtttttcgcgagctctgatctg
agcgtatctgaatcgaatgagtcaaaggaagaatctgatgactttgagaaatcagaccac
gccccgtcgctagctgtagaaacgctcggtgcagagacggagacaccgccacggcgcgcc
agcctgagcgccttcagctggtccggcagctccagctccacagaactctccagacccgga
tccgcaacgtcggaccgaaccagaactcccagcatgccctcgggcctctctgtcctgcag
cagttccagagaaagaaggagaatctcagctggggacagactgaatctcctcagcgctct
acaccctgctctcctacagagggcgctgttgatactgaaacgcctcctgattctcctccg
tctcaggacagtgcgtatttctctcagcccaacagcagccactccgccgcggaggactcg
accaccggcactcagagcgtaaccacctcgcccgaaacggagaaggacacgtggagggat
tcgggatgttcggtgagtctcggtgaggtgtctgtgacggaggaggtcagatctacaccc
acgaggacgaaggtgtccggtttgtcccgaatcagtcccagcgagcaggagaagggcagt
aagatccggccctgtgctccggccagggcgagtggattgaggaagaaggctccggggaag
aaaatggccgtcacgaacgagaacagcccgggactgcaggccaccatcagcggcctgtgg
aaaaacttcagctttaatagggagaacccaaagttaaacccctgtaagaaaggtaagccc
atgtctccggtgaaggacaacgtgcagtaa

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