Ictalurus punctatus (channel catfish): 108270126
Help
Entry
108270126 CDS
T04658
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108270126 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ipu03051
]
108270126 (psmc1a)
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108270126 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
AAA_25
ATPase
AAA_14
RNA_helicase
NPHP3_N
TIP49
NB-ARC
AAA_33
NACHT
IstB_IS21
Prot_ATP_ID_OB_N
Mg_chelatase
AAA_7
ABC_tran
Parvo_NS1
AAA_24
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
108270126
NCBI-ProteinID:
XP_017331976
Ensembl:
ENSIPUG00000000956
UniProt:
W5UK83
LinkDB
All DBs
Position
9:17523711..17530202
Genome browser
AA seq
440 aa
AA seq
DB search
MGQNQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTLAADVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaatcagagtgggggacatggccctggaggagggaagaaagatgataaagat
aagaaaaagaaatatgagcccccaattcccacaagggtgggaaagaagaagaagaagacg
aaaggcccagacgctgcaagcaagcttcctttggtgactccacacacacaatgcagactg
aaactgctgaaacaggagaggatcaaggactatctgctgatggaggaggagttcatcagg
aaccaagagcaaatgaagccacttgaggaaaaacaggaggaggagaggtccaaagttgat
gacctgagaggcactcccatgtcagtaggaactcttgaagagatcattgatgataaccat
gccattgtctctacgtcagtgggctcggagcactatgtcagcattctctccttcgtggat
aaagaccttctggaaccaggctgttctgttttactgaatcacaaggtgcatgccgtgatc
ggtgtgctgatggatgacaccgatcctctggtgacagtgatgaaggtggaaaaggctcct
caggagacatatgctgacattggaggcctggacaaccaaattcaagagatcaaggagtca
gttgagcttccacttacacacccagagtattacgaggagatgggaataaagcctcctaaa
ggagtcattctgtatggtgcaccagggacaggtaagaccctgctggctaaagctgtggcc
aatcagacatctgccacattcctgagggtggtgggttcagagctgattcagaaatacctg
ggcgatggtcccaaactagtccgagagcttttcagagttgcagaggagcatgccccctcc
atagtcttcattgatgagattgacgccataggaacaaaaaggtacgactccaactccggt
ggagagagagagatccagaggaccatgcttgagctcctgaaccaactggatggatttgac
tcccgtggtgacgtcaaagtaatcatggctactaatcggatagaaacacttgaccccgcc
ctcatccgtccaggtagaatcgaccgtaagattgagttcccactgcctgatgagaagacc
aagcgtagaatcttccagattcacaccagcaggatgactttggcagctgacgtaaccctc
gatgaccttatcctcgctaaagatgacctttctggcgctgacataaaggcgatttgcaca
gaagcagggcttatggccttgagggagaggaggatgaaagtaacaaatgaagacttcaag
aagtctaaagagaacgtgctctacaaaaaacaggaagggaccccagagggcctctacctt
taa
DBGET
integrated database retrieval system
