Ictalurus punctatus (channel catfish): 108270142
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Entry
108270142 CDS
T04658
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108270142
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108270142
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108270142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
108270142
NCBI-ProteinID:
XP_017332017
Ensembl:
ENSIPUG00000008198
UniProt:
A0A2D0RND5
LinkDB
All DBs
Position
1:complement(17067169..17077019)
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AA seq
724 aa
AA seq
DB search
MGRKLDPTTKVKRGPGRKARKQKGAEIELAKLLVNEDEPKKLSSRGRKRAVKRAKGATAR
TDEKQPKKGFSDDNSKWLTPAKRKRKIDHSEGDDDSDSQWEQEEDDGDEVEDIEQGVKEQ
LEADDDDDDDDMVDDYGAMEDSSEGQEQEDEAAGSDGEELLPIERAARKQKKRQEAAAPE
GEDDDDDDDDDDEEEEEEEDDEQEEEEEQDTVQANIDHMDRFKLPSAEEKDKEGHLLLDL
QSVHQRIKDNVDVLSHFTEKREEGRTRSEYLSLLKSDLCTYYSYNDFLMGSLMELFPNAE
LIDFLEANEVQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIG
ATPEYLAGHYMLQGASSLLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGVIVAND
ASAERLKSVVGNVHRLGVTNTIICNYDGRAFPKVMGGFDRVLLDAPCSGTGVISKDPAVK
TSKDTSDILRSAHLQKELILAAIDSVNADSQTGGYLVYCTCSITVEENEWVVDYALRKRN
VKLVPTGLDFGKEGFTRFKERRFHPSLKLTRRFYPHSHNMDGFFVAKLKKFSNTIPTSPA
VDEENEKASETETPATSEEKNSKPESKQQSKGTRGNVKAASNSKTESPNAKKKPVVKGKK
LKDEGPKKKRAKMDEQNSKEGKTKEKLQALKIHKDITNESVTEKAEGSLLKKKTNKKNQK
KLFK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagctcgatcccaccaccaaggtgaagcgtggacctggacggaaagcacgg
aaacagaaaggcgcagaaatcgagctggccaaacttttagtcaatgaggatgagcctaaa
aaactgtctagcagaggcagaaaacgtgctgtgaagagagcaaagggtgccactgcacgc
acagacgaaaaacagcccaagaaaggattctctgatgacaacagcaaatggctgacacca
gcaaagcgaaagcgcaaaattgaccattcagaaggggacgatgacagcgacagccagtgg
gagcaggaggaagacgatggggatgaagtagaggatatagagcaaggagtaaaagaacaa
cttgaggctgatgatgatgatgatgatgatgatatggtcgatgactatggagcgatggaa
gatagcagtgaaggacaagaacaggaggacgaggcagcaggcagtgatggagaggagctg
ctacctattgaacgagctgccaggaaacagaaaaaacgccaggaagccgcagcaccagag
ggtgaagacgatgacgatgacgacgacgatgatgatgaggaggaggaggaggaagaagat
gatgaacaggaggaggaagaagaacaggacacggtgcaggcaaacattgaccacatggac
aggtttaaactgcctagtgcagaggagaaagacaaagagggacatttgcttctagacctg
cagagcgtccaccagaggatcaaagacaacgtggatgtgctctctcacttcactgagaag
agagaggaggggagaacacgatcagagtacctctcactgctgaagtcagatctctgcaca
tactacagctacaacgacttccttatgggcagtctcatggagctgtttcctaacgctgag
ctcatagattttctggaggccaatgaagttcagaggcctgtcacaattaggaccaatacc
cttaaaaccaggaggagagacctggctcaggctctgatcaatagaggagtaaatctggat
cctttggggaagtggtctaaagtgggactggtcatctttgattcctcagttcccataggt
gcaactcctgagtatctagctgggcactacatgctgcagggagcgtcgtcactgcttcct
gtaatggcgctctctccccaggagggggagtcggtgttggacatgagtgcggctcctgga
gggaagaccacatatatggcccagctgatgagaaacacaggagtgatagttgctaatgat
gccagtgctgagaggcttaaaagtgttgtgggaaacgtccatcgtctgggagtcaccaac
accatcatctgtaactatgatggcagagcgtttcccaaggtgatgggaggttttgacaga
gtgttgttggatgctccttgctcaggtacaggggtcatctctaaagatccagcagtgaaa
actagcaaggacacttcagatattctgcgctcggctcatctacagaaggagctgattctg
gctgccattgactcagtcaatgccgactcacagacgggtggctatcttgtctactgcacc
tgctccattacggtggaagagaacgagtgggttgtggattatgccctaaggaagagaaat
gtaaaactggttcccacaggattggactttggcaaagaaggcttcacaagatttaaagag
cgacgtttccacccttcacttaagctgactcggaggttctacccacattcccacaacatg
gatggcttctttgtggcaaagctgaagaagttctctaacaccatccccacttcacctgca
gttgacgaagagaacgaaaaggccagcgaaacagaaacacctgctacatcagaggaaaaa
aactccaaaccagagtctaagcaacagagcaaaggtacacggggaaatgtcaaagctgct
agcaacagcaaaactgaaagccccaatgccaagaaaaagccagtggtaaaaggtaaaaaa
ttaaaggatgaaggtcccaaaaagaaaagggcaaaaatggatgaacagaattcaaaggaa
ggcaagaccaaagaaaagctccaagccctaaaaatacacaaagacataacaaatgagtct
gtgactgagaaagcagagggaagcttgcttaagaagaagacaaacaaaaagaatcagaag
aagctttttaaatga
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