Ictalurus punctatus (channel catfish): 108270152
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Entry
108270152 CDS
T04658
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108270152 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108270152 (zfp36l1a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108270152 (zfp36l1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
108270152
NCBI-ProteinID:
XP_017332026
Ensembl:
ENSIPUG00000023681
UniProt:
W5UK40
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Position
9:complement(14107432..14112428)
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AA seq
372 aa
AA seq
DB search
MTTAVVPPLFDFSEVINNKNNKMLNYNNNILGAPHTMPVPCTGVNLTISNPTGSLLDRKA
VGTPSIGGVYQRRHSVTLPSSKLNQNQFLSNGKADLALVGPGMGNSSNKENRLRDRSFSE
TGDRLMQKCTGSGGTGSSQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLSRH
PKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPAAPSPLSTSNKLERPRLQHSYSFA
GFPSSGGLRDSPTSVTPPPMFSPDELSEWPSSNPFTYSSQELVNLFGPSLSSGSGADHTV
HAPSSPSNTPYSFRPMSESPHLFESPSSQPDSLSDQEGYQSSSGGSLSGSESPILDTTRR
LPIFSRLSISDD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggctgtggtgccgcctctgtttgacttcagcgaagttatcaacaacaagaac
aacaaaatgctgaattacaataacaacatacttggtgctccgcacaccatgcctgtgccc
tgcactggtgtgaatctgaccatctccaaccccactgggagcctgctggacaggaaggct
gtggggacaccctccattggtggggtttaccaacgacggcactcggtcactttgcctagc
agcaagctcaaccagaaccagttcctgagcaatgggaaagcagatctggcgttggtaggc
cctgggatgggcaacagcagcaacaaagagaaccgacttcgagatcgttctttctcagag
accggggaccgtctgatgcagaagtgcaccggatctggcggcactggaagcagtcaggtt
aactcaagccgctataaaacagagctgtgcaggccatttgaagagaatggtgcatgcaag
tacggtgacaagtgccagtttgcccatggcattcacgagctccgcagccttagccgccac
cccaagtacaagacagaactctgccgcaccttccataccattggcttctgcccatatggg
ccacgctgccactttatccacaatgcagaagagcgccgtggacctccagctgccccatcc
ccactctccacatccaacaagctggaaaggccacggctccagcacagttacagtttcgca
ggatttcccagctctggaggcctaagagacagccccacctctgtcacacctccaccaatg
ttctctccagacgaactgtctgagtggcccagcagcaatcccttcacttactccagccag
gagctggtcaatctctttggtcccagcttgagcagtggttctggtgctgatcacactgtc
catgcaccatcctctccatccaacaccccttactcttttaggcccatgtctgagtctccc
cacctctttgagtctccgtccagtcagccagactccctctctgaccaggagggctaccag
agcagctcaggagggagcctgagtggctcagaatcacctatccttgataccacccgccga
ctgcccatcttcagcaggctgtccatctcggatgattaa
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