Ictalurus punctatus (channel catfish): 108270225
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Entry
108270225 CDS
T04658
Name
(RefSeq) STAGA complex 65 subunit gamma
KO
K11316
STAGA complex 65 subunit gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108270225
03036 Chromosome and associated proteins [BR:
ipu03036
]
108270225
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108270225
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108270225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
AmpE
DUF3731
Bromo_TP_like
Motif
Other DBs
NCBI-GeneID:
108270225
NCBI-ProteinID:
XP_017332168
Ensembl:
ENSIPUG00000010373
UniProt:
W5UF45
LinkDB
All DBs
Position
9:23886163..23891906
Genome browser
AA seq
419 aa
AA seq
DB search
MMRYWGELPVASVPPGRSSFDLLQREFRQVEMQDPPLHQPSARRPRPTTMLDVPSEPCSL
TIHTVQLCQHTRRLRSLITAAQLGQQPPGTGSETQGILKSEDVDSLPPRPVTPAAPDDLL
PLDSKAPRELFQLRHSDPESDFYKGEGEPVTELSWLSCRQLLYQSVATVLAHAGFESAME
SVLETLTDLVHEHYLRLTRLLRVAVDREAHLGSTPFPDVVEQVFHEVGIGSVLALQHFWQ
VRIKDYHSYMLQVSKELSDEYERLVNPEKALEDSNPLKVKEEPISDLAFTLNEEAEGELT
SAEQQNSMPTGVLGISDRLAGGLEDGHSPHTSGAAGNGSPLWQLQQVKMEPQDSEEGQVS
GHGVLTSDVFEEGPMSTMSDAGTAPSPGGSDASCGSHSPDSLIGTSPFNQRPKKRMRKV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctactggggtgagctcccggtggcctctgtcccaccaggccgtagctccttt
gatctcttgcagcgtgaatttcgtcaggtcgagatgcaagaccctcctctgcaccagccg
tcagcacggcgtcctaggcccaccaccatgctggacgttccttctgagccctgcagcctc
acaatccacacggtgcagctgtgccagcatacccgacgactccgcagcctaatcacggca
gcacagctgggccagcaaccaccaggcacagggtctgagactcagggaattctcaaatca
gaagatgtggattcattaccaccacgtccggtcacaccggcagcaccggatgatcttctg
cctttggacagcaaagctcctcgtgaactgttccagctacggcacagtgacccagagagt
gacttctacaagggtgaaggagagcccgtgactgagttgagctggctgtcatgccgccag
ctcctataccagtcggttgccacagttttggcgcatgcaggtttcgagtcggcgatggag
agcgtgttggagaccctgactgacctggtgcatgagcattacctgcgtctgacacggctg
ctgcgcgtggctgttgaccgcgaggcccacctcggctccactccttttccggacgtggtg
gagcaggtcttccatgaggtgggcatcggcagtgtgctggctcttcagcacttctggcag
gtccgcattaaagactaccacagctacatgcttcaggtcagcaaagagctctcagacgag
tacgagagattggtcaacccagagaaggccctggaggattccaatccccttaaagtaaag
gaggaacctattagtgatcttgccttcactctgaatgaggaagccgaaggggagttgact
tcagcagagcagcagaacagcatgcccactggagtactgggaatcagtgatagactggct
ggaggactggaggatggacactcgcctcacacctcaggtgcagcaggaaatggctccccc
ttgtggcagctgcagcaggtaaagatggagccgcaggacagtgaggagggccaggtttca
ggccacggcgttctcacaagcgacgtctttgaggagggtcctatgtccaccatgagtgac
gctggaacagctccatctcccggcggctctgatgccagctgtggctctcactctccggac
tcactgataggcacctcccctttcaaccagcggccaaagaaacgaatgcgcaaagtataa
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