Ictalurus punctatus (channel catfish): 108270240
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Entry
108270240 CDS
T04658
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase E isoform X1
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108270240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108270240
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108270240
Enzymes [BR:
ipu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108270240
Spliceosome [BR:
ipu03041
]
Complex B
Other components
Prp19-related factors
108270240
Complex C
108270240
Chaperones and folding catalysts [BR:
ipu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108270240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_5
RON4
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108270240
NCBI-ProteinID:
XP_017332202
Ensembl:
ENSIPUG00000016601
UniProt:
A0A2D0RNW9
LinkDB
All DBs
Position
9:complement(29562296..29567697)
Genome browser
AA seq
310 aa
AA seq
DB search
MFSWEEIICVVDVKRQTKGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFI
EFELAEDAAAAIDNMNESELFGRTIRVNIAKPMRIKEGSSRPVWSDDDWLKKFSGKTTEE
AEEAEPAGEASKTMTQEGEPPAKKGRANPQVYMDIKIGNKPAGRLRMLLRADVVPMTAEN
FRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGHKFDDENFVLKHTGP
GLLSMANSGSNTNGSQFFITCDKTDWLDGKHVVFGELLEGMDVVQAMEAQGSKDGKPKQK
VIISDCGEYE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttgggaagaaattatttgcgtggttgatgttaaaagacagacgaaaggtggt
ttagcagaagaagtggatgaaaaagtgttacatgcagcgttcattccattcggcgacatc
acggatattcagatccctttggattatgaaaccgagaagcatcgtggttttgccttcatc
gagtttgagctggctgaggatgctgcagcggccattgataacatgaacgagtcggagctg
tttggtcggaccatcagagtgaacatcgccaaacccatgaggattaaagagggctcgtct
cgacctgtctggtctgatgacgattggctgaagaagttctcagggaagacgacagaggag
gcggaggaggcggagccagccggagaagcgagcaaaaccatgacccaggagggagagcca
ccggctaagaagggcagagcgaacccacaggtctacatggacatcaagatcggtaataaa
cctgcaggaagactgcgcatgttactccgagctgacgtggtgcccatgactgcagagaac
ttccgttgcctgtgtacacacgagaaaggtttcggcttcaagggcagcagcttccacagg
atcatccctcagttcatgtgtcagggaggtgacttcaccaaccacaatggcaccggcggc
aaatccatctacggacacaagttcgacgatgagaactttgtgctcaaacacaccggtcca
ggtctgctctcaatggcgaactctggttcgaacacaaacggctcgcagttcttcatcacc
tgtgacaaaacagattggctggatggcaaacacgtggtgttcggagagcttctggagggc
atggatgtggtgcaggccatggaggctcagggaagtaaagatggcaaacccaaacagaag
gtgattatatctgattgtggagagtacgaatga
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