Ictalurus punctatus (channel catfish): 108270244
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Entry
108270244 CDS
T04658
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X2
KO
K27409
spectrin beta, erythrocytic
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108270244 (sptb)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108270244 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
108270244 (sptb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
108270244
NCBI-ProteinID:
XP_017332206
Ensembl:
ENSIPUG00000023742
UniProt:
A0A2D0RPW5
LinkDB
All DBs
Position
9:14514456..14544473
Genome browser
AA seq
2471 aa
AA seq
DB search
MSSPCLCHTMPVSQSQLPEVKLSLKTSREVSSIRSSAYSSGKELPIRISTQATRSRSTPP
VSRFQCSENKAAPKTNGHTKHEPKNLPERNSTLRGIPPTQAPLTVSASSSSSSSSSSSYT
SRLSRPSPPQKPSSSSSSSSQSMKRTRWLSHSTSNIYFNSILDGRFRLLQDEREAVQKKT
FTKWVNSILARVSCRISDLYLDLRDGRMLIKLLEVLSGERLPRPTKGRMRIHCLENVDKA
LQFLREQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVESDLTGKQETRSAKD
ALLLWCQMKTAGYPNVNITNFTTSWKDGLAFNALIHKHRPDLVDYGNLQRSNPTHNLQQA
FNVAERNLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDQA
IETEEMIKMYETLSSDLLTWIEQTIIILNNRKLANSLNGVQQQLQAFNSYRTVEKPQKFQ
DKGNLEVQLFTIQSRMRANNQKVYTPKEGALVADINRAWERLERAEYERERVLRDELIRQ
ENLEQMARRFDRKAAMRETWLLENQKLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEER
VQALVALSKELEAERYHDAKRIDARKDNILRLWDYLQELLSARRGRLEKNLTLQRIFQEM
LYIINWIDEMKNRLQSPDFGKHLLEVEDLLQKHALIEADIAVQAERVSSANAAALKFANG
DSYKPCDPQVIRDRVQHLDLCYQELCALAAQRKARLEQSRRLWHFFWETAELESWIREKE
HIFSSLDYGKDLTSVLVLQSKHRAFEDELGAWRDHLKELMGESEKMIKAKHFGTPKVQQR
MQEVQRQWQQLEELAAFRKQNLQDTQHFFQFQGDADDLKAWLLDAIRLMSSEDIGHEEYT
TQRLLKRHHALSDEAVKNGATIDALSKQANSLPEELKNTPDIQRRLQDIRDLYMELLSLS
DLRQKKLEDTMALYTIFSETDACELWMGQKETWLIGLETPETLEDLEVVQNRLSILAQEM
GNMQILVDNINRAAKQLEDSRHPRYKEVKDCQTRLNKRWDAFKDMVESKKHKVDSALSLH
NYGLECDETGAWIKDKTRVIESTQDLGNDLAAVMTIQRKLYGMERDLAAIQDKLDFLRGE
AQQLVKDHPENAADILAQQAELNKAWETLKQTLKDREDSLGEVSKLQNFLQNLDDFQSWL
FKTQKAIASEEMPTSLPEAEKLLSLHDALKDDMDSHEEDYHSIRDTGAAVTRDQEEDAQY
QELDQRLKGVDKGWDELQKMWESRKNYLDQGLGFQQFSRDAKQAETILNNQEYVLAHLEQ
PDTLDGAEKALKKHEDFVTTMDANEDKIIHTLDGGQRLIDSGNLYSPKVKDKINSIQDRY
EKNQDKAKEVSKKLRDNKDLQHFLQNTQDLTLWINEKMLTAQDTSYDEARNLHSKWQKHQ
AFMAELASNKDWLNKIDQEGKELMASKPEFEPIVKERLTKLHELWNKLEHTTQEKARLLF
DAHRSELFEESLADLKKWLANLQQQLQGDVNEEVKDLTSANILLKKHQMTENQVRDRGRE
LQELQEAVQQHTPLTEEQPELEAEQQIVQRDFQQLLTPLAQRKGQLEAAKAVYQFYRDVA
DEILWLEERLPMAMSQDHGNNLQTVQLLLKKNQTLQKEIEGHQPRMDEVLQRGRRMMAAA
EGSPEAEHMSEEMKRLEEVWARLQDEMAKRRARLNASNDAQQYYNDADEAEAWIGEQELY
MIADDKAKDEQSAVILLKRHLVLKQVVDDYADSIQKLADHAQKMFAEEHPEGEAIIRRQG
QVDKQYAGLKELAEDRRKNLDHTYHHFLMSREVEDLEQWIAERDVVASSQEMGQDLDHVT
MLRDKFREFARETGTVGQERVDAVNHIIDELIEAGHSESSTLAEWKDGINESWADLLELI
DTRTQLLTSFYDLFKYFYDGKELVVQIEEKQNELPEDVGEDFSKAESFHRMHAAFERDIS
SLGKQVQQFQDTAARLHAQYAGVQADAIKATEKEVVDAWKGLLAACAGRRKELEETANKF
RFFTMVRDLMAWMESIIQQIETQEKPRDVSSVELLMKYHQGIRAEIETRGPKFNDCVALG
RTLLAQKHRDANEIKEKLMQLLEKREEMMLKWDDRWDWLRLLLEVCQFARDASVAEAWLV
AQEPYVASKDLGESVDEVEKLLKRHDAFEKSTATWEERFSALERLTTLELIQIRKQQLEI
QQYREEEEKDSRRDDTGYVEESSRLDTIEEQSLSGMAAVDPSSGHGDSTAGDSVVPMISD
IQESVELEPSTSTQATKEAERAATLPIMPTQSQPPLLQGTLTRKHEMEGPNKKAANRSWN
SIYFVLKPGQLSAYKDAKSFAHGVTYHGEDPLSLHDAVCEILTNYKKRKQVFKLRLGDGS
EYLFQCRDEEELKIWTKAIEKAAENVAEEQVEGPSEPQAQSLPLPSSSTASDVPSAKKEK
EKRFTLFTKKK
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccttgtctgtgtcacaccatgcctgtgagtcagagccagttgccagaggtg
aagctcagcctgaagaccagcagagaggtcagttcaatccgctccagtgcctactcctca
ggaaaagaactccccatccgcatcagcactcaagccaccagaagcaggagcacaccgcct
gtgtccagatttcaatgtagcgagaacaaagcagcacccaagactaacggacacaccaag
catgaacccaagaatttgccagagaggaacagcactttacggggcattccaccaacccaa
gcccccttaacggtctctgcctcctcctcctcgtcttcctcttcctcatcctcctatact
tcgagactatcccgaccctcgcccccgcaaaaaccttcttcatcctcatcatcctcttcg
cagagtatgaaacgcacccgctggctaagccacagcacctccaacatctacttcaactcc
atcttagacgggaggttcagacttcttcaagatgagcgagaagctgtgcaaaagaagacc
ttcacaaaatgggtaaactccatcctggctcgagtcagctgccggatctcagacctctat
ctagacctgagggatgggaggatgctcatcaagctacttgaggttctgtcaggtgaaagg
ctgcccaggcccactaaaggtcgaatgaggattcactgtctggagaatgtagacaaggcc
ctgcagtttctaagggagcagagggttcatttggagaacatggggtcacatgatattgta
gatgggaaccatcgacttatcttggggctcatttggacaatcattcttcgcttccagatt
caagacattgtagtagaatcagacctgacgggtaagcaggagacacgctctgctaaagat
gccttgttgctttggtgtcaaatgaagacagctggatacccgaatgtaaatatcaccaac
ttcaccacaagctggaaggatggcttagcttttaatgccctcatacacaaacacaggcca
gatctggttgactatggcaacctgcagagatccaatccaactcacaatcttcaacaagct
ttcaatgtggctgagagaaatcttggagtcaccaagctcttggacccagaagatgtgttt
actgagaacccagatgagaagtccatcatcacttatgttgttgctttctaccattacttc
tccaagatgaaagctctggcagttgaaggcaagcgagttgggaaggtgctggaccaagcc
attgaaacagaagagatgattaagatgtatgagacactttcctcagacctgctaacatgg
attgaacagaccatcattatcctcaacaaccgcaaactcgcaaactctttgaatggagtc
cagcaacaattacaagccttcaactcgtaccgtactgtggagaagcctcaaaaattccag
gataagggaaacctggaagtacagctcttcacaatccagagcaggatgagggccaacaat
cagaaggtttacacccctaaagaaggcgcattggtggcagacatcaacagggcatgggag
cgattggagcgcgctgaatatgagcgagagcgggtgcttagagatgagctcatcaggcag
gaaaatcttgaacaaatggcccgtcgttttgacagaaaggctgccatgagagaaacctgg
ctgctggagaaccagaaactggtagcacaggacaattttggatatgatctaccagcagta
gaggcagcgaagaaaaagcacgatgccattgagacagacattgctgcatatgaggagcgt
gtacaagccctggtggccttgtctaaagagcttgaggcagagaggtaccatgatgctaaa
cggattgatgcaaggaaggacaatatcctgaggctttgggactacctccaggagcttctg
agcgctcgcaggggccgcctggagaagaatctcaccttgcaaagaatcttccaggaaatg
ctttacatcattaactggatagatgagatgaagaatcgtctccagtcacctgattttggg
aagcacttgttggaggtggaggaccttctgcagaagcatgctttaatcgaggcagatatt
gctgtgcaagcagagagagtgagctctgctaatgcagctgctctcaaatttgcaaatgga
gacagctacaaaccatgtgacccccaagtgattcgagatagggtacagcacttagaccta
tgttatcaggagctgtgtgcacttgcagcacaacgcaaggcacgtttggaacagtctcgc
cgtctatggcacttcttctgggaaacagctgaactggagagctggatccgtgagaaggaa
cacatattttcctctctcgactatggcaaggacctgaccagtgtgctggtgcttcagagt
aaacaccgtgcttttgaagatgagctgggtgcttggcgtgatcacctgaaggagctgatg
ggtgaaagtgagaagatgataaaagccaagcattttggtacccctaaggtgcagcagcgc
atgcaggaagtacagaggcaatggcagcaacttgaggagctggctgcattccgcaaacag
aacctccaggacacgcaacatttcttccagttccagggtgacgctgatgaccttaaggcc
tggttgttggatgccatccggcttatgagctctgaagatattgggcatgaggagtacacc
acacagaggttgctcaagaggcatcatgccctaagtgatgaggcagttaagaatggagcc
accattgatgctttgagcaaacaggccaattcactgcccgaggagctaaagaacacccct
gacatccagcggcgtttgcaggacattagggatctgtacatggagctcttgtctctctca
gacctgcgacagaagaagctagaggacactatggcactgtacaccattttcagtgagaca
gatgcctgtgagctctggatgggtcagaaagagacatggctgatcgggttagaaacacca
gagacgttggaggatctggaggtcgttcagaataggttaagcatccttgcccaagaaatg
ggcaacatgcagatattggtggacaacatcaacagagcagccaagcagctagaggacagc
aggcacccacgatacaaagaggtgaaagattgtcagactcgtctcaataagaggtgggat
gcatttaaggatatggtagaatctaagaagcataaggtggattcagcactcagtcttcac
aattatgggcttgagtgtgatgaaaccggggcatggatcaaagacaagacacgagtcatt
gagtctacacaggaccttggaaatgacctggctgctgtcatgactatccaaaggaaactt
tatggcatggaaagagacctggctgctattcaggataagctggacttcctgcgtggtgag
gctcaacaacttgtcaaggaccatcctgagaatgccgctgacatcttggcccaacaagca
gagttaaacaaagcttgggagacattgaaacaaacgctaaaggatagagaggattctctc
ggtgaagtaagcaagttgcaaaactttctgcagaacctggatgactttcagtcttggctt
ttcaagacacagaaggccattgcatctgaggagatgcctacaagcctgccagaggcagag
aagctcctaagtcttcacgatgcactaaaagatgatatggatagccatgaggaggactat
cacagcattagagacactggagcagccgtcacccgtgaccaagaggaggatgcccaatac
caagagctggatcagaggctgaagggtgtagataagggttgggatgagctgcaaaaaatg
tgggaaagccgaaagaactatttggaccaaggcttgggtttccaacagttctcaagagat
gcaaagcaagctgaaaccatcttgaacaaccaggagtatgttctggctcacctggaacag
cctgacacactcgatggggcagagaaggctttgaagaagcatgaggactttgtcaccact
atggatgctaatgaggacaaaataatacatacactagatggaggtcaaaggctgatagac
agtggaaacctttactcaccgaaagtaaaggacaaaataaactctatccaagacagatat
gagaagaaccaagacaaagccaaagaggtatctaagaaactcagagacaacaaagacctg
caacactttcttcagaacactcaggatcttactctgtggataaatgagaagatgctgact
gctcaggacacctcatacgatgaggctcgcaaccttcacagcaaatggcaaaagcaccag
gccttcatggcagaactggcttcaaataaggattggctcaacaaaattgatcaggaaggt
aaagagttgatggcctccaaaccagagtttgaacccattgtgaaggaacgtctgacgaaa
cttcatgagctgtggaacaagctggaacataccacacaggaaaaggcccgacttctgttt
gatgcacatcgctcagagctgtttgaagagagcttggctgatttgaagaagtggttggct
aatctgcagcagcagctccagggtgatgttaatgaggaggttaaagatcttactagtgcc
aatatccttctcaagaagcatcagatgactgagaatcaggtgcgagaccgaggtcgggag
ctgcaagagctgcaggaagctgtgcagcagcatactccactgactgaagagcaaccagag
ctggaagctgagcagcagatcgtccagagagactttcagcaactccttacacctctggct
caacgcaagggacagctcgaggcagctaaagctgtgtaccagttctacagagatgtggca
gatgagatactctggcttgaagagaggttgcctatggccatgtcacaggatcatgggaac
aatctacagacagtccagcttctcctgaaaaagaatcagaccctccagaaggagattgaa
ggtcaccagccacgtatggatgaggtgttgcagcggggtcgacgtatgatggcggctgca
gaaggtagcccagaggcagagcatatgtctgaggaaatgaagaggttggaggaggtctgg
gcacggctgcaagatgaaatggcaaaacggcgagctcgactcaatgcctctaatgatgcc
cagcaatactacaatgatgcagatgaagcagaagcatggattggtgaacaggaactctac
atgattgctgatgataaagcaaaggatgagcagagcgctgtgattttgctaaagcggcac
ttggttctgaagcaggttgttgatgactatgcggattctatccagaagctcgctgaccat
gctcagaagatgtttgctgaagagcatcctgaaggggaggccatcatccggaggcagggt
caggtggacaaacagtatgcaggactgaaggagctggctgaggaccgcaggaagaacctt
gatcacacttaccatcacttcctcatgagccgggaggtggaagatctggagcagtggatt
gctgagcgtgatgtggtggcttcttcacaggaaatgggacaggacctggaccatgttacg
atgctgagggataagttcagggagtttgccagggagacggggacagtgggacaggagcgg
gtggatgctgtcaatcacatcattgatgagctgatcgaggctggtcatagtgaatcatct
actctggctgaatggaaggacggcattaacgagagttgggcagatctcttggagctcatt
gacacccgcacacagctcctcacgtctttttatgatctgtttaagtacttttatgatggc
aaggagttggtagtccagatcgaggagaaacaaaatgagcttccagaagatgtgggagag
gatttcagcaaggcagagtctttccatcgcatgcatgctgcatttgagagagatatcagc
tcccttggaaagcaggtacagcagttccaggacactgcagcgcgtctgcatgcccagtat
gctggagtccaggcagatgccatcaaggcaacagagaaagaggtggtagatgcatggaag
ggtcttctggctgcctgcgcaggtagacggaaagagctggaggagacagcaaacaagttc
cgttttttcaccatggttagggatctaatggcctggatggaaagcatcatccagcaaata
gaaactcaggagaaacccagagatgtgtcatcagtggagttgctaatgaagtatcaccaa
gggatccgtgcagagattgagactcgtggaccaaagtttaatgattgtgtggcattaggg
cggactctactagcacagaagcacagggatgcaaatgagatcaaagagaagttgatgcag
ctacttgagaagagagaggaaatgatgcttaaatgggatgacagatgggactggcttaga
ctgttgttagaggtgtgccagtttgcccgagatgcatctgtagcagaagcctggctggta
gctcaggagccgtatgtggccagtaaggacttgggtgagtctgtggatgaggtagagaag
ttgctcaagaggcacgatgcctttgagaaatccactgccacctgggaggaacgattctct
gcactggagcgccttacaacgcttgaactgattcaaatcagaaagcagcagctggaaatt
cagcaatacagagaggaagaggaaaaggacagcaggagggatgacacaggctatgtcgaa
gagtcctcacgtttggacacaattgaggagcagtctctttctggcatggcagcagtagat
ccaagctcaggacatggagatagcactgcaggggactcagtggtgcccatgatttcagat
attcaggagagtgtggaactggaaccctcaacgtccacccaggctaccaaagaggcagag
cgtgctgccactcttcccattatgcctacacaatcccagccacccctgctgcagggaacc
ctcacacgtaaacatgagatggagggacctaataaaaaagcagccaataggtcgtggaac
agcatctattttgttttaaagcctggccaactttcagcctacaaggatgcaaagagtttt
gcccatggtgttacataccatggagaagacccgctgtcactccacgatgctgtttgcgag
attctgaccaattacaagaaaaggaagcaggtgtttaaactgcggcttggagatggaagt
gaatacctattccagtgtagagatgaggaagaactgaagatctggactaaggccatagag
aaggcagcagagaatgtggcagaggagcaagtagaagggccttcagaacctcaagcccag
agcttgccccttccttcatcctcaactgcctcagacgttccctctgccaagaaggaaaag
gagaagaggtttactttattcaccaaaaagaagtga
DBGET
integrated database retrieval system
