Ictalurus punctatus (channel catfish): 108270259
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Entry
108270259 CDS
T04658
Symbol
nkx2.9
Name
(RefSeq) NK2 transcription factor related, locus 9
KO
K09347
homeobox protein Nkx-2.8
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108270259 (nkx2.9)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108270259 (nkx2.9)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108270259
NCBI-ProteinID:
XP_017332250
Ensembl:
ENSIPUG00000023703
UniProt:
A0A2D0RQ09
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All DBs
Position
9:14339468..14341943
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AA seq
219 aa
AA seq
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MAVPARLSFTVRSILDLPENDSESAAHLLPLHSLSSSPYSSWTDSDRGHCMSSDESNPEA
SPDSTGSNDPPAEADQEKKKKRRVLFSKAQTYELERRFRQQRYLSAQEREQLAHLLRLTP
TQVKIWFQNHRYKMKRARVECVQDFGPPPVLRRVVVPILVRNGKPYQSCISETEKGGCVV
PPSSCGPRGFQPFQPSTFALLPQYQHFTNPTASTHHFLW
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcctgccaggctcagctttaccgtgaggagtattttggatttaccagaaaat
gacagcgagagcgcagcgcatcttttgccactccactcgctctctagctctccttactca
tcctggacagacagcgacagaggccactgcatgtcttcagatgagagcaatccggaggcg
tcccctgactccaccgggtctaatgatcctcccgcggaggcagatcaggagaagaaaaag
aaacggcgtgtcttgttctccaaggcccagacctatgagctggagaggcgcttccggcag
cagcgctacctgtctgctcaggagcgcgagcagctcgcgcacctcctccgcctcacgccc
acacaggtcaagatctggttccagaatcacaggtataagatgaagcgagcgcgggtcgag
tgtgtacaggatttcggtccacctccggtgctgcgcagggtcgtggtgccaattctagtg
cgaaacggtaaaccatatcagagctgtattagcgaaactgaaaagggaggctgcgtggtt
ccgccatcgtcttgtgggcctcgagggttccaacctttccagccgtcaacttttgcgctt
ctaccgcagtaccagcactttacaaacccaacagcctccacacaccatttcctttggtga
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