Ictalurus punctatus (channel catfish): 108270300
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Entry
108270300 CDS
T04658
Symbol
nkx2.2a
Name
(RefSeq) homeobox protein Nkx-2.2a
KO
K08029
homeobox protein Nkx-2.2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108270300 (nkx2.2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108270300 (nkx2.2a)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108270300
NCBI-ProteinID:
XP_017332326
Ensembl:
ENSIPUG00000024361
UniProt:
W5UED0
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Position
9:16329116..16377557
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AA seq
268 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSITGTEEDTEGSESTKTPGVLVQSPIENVQNLPL
KNPFYDNTDNPYTRWLATTDTIQYSLHGLSATSQDSSAKSPEPSADESPDNDKETSSSGS
DSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM
KRARAEKGMEVSHLPSPRRVAVPVLVRDGKPCHALKTQDLAATFQAGIPFSAYSAQSLQH
MQYNAHYSAAATPHFPTAHLVQTQQWTW
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaccaacacaaagacgggtttttcggtgaaggacattttggacctccctgac
acaaacgatgaggaaggatctatcactggcactgaggaggatacggagggctcggagtcg
actaaaacacctggagtgctggtgcaaagcccgatagagaatgtccaaaacctgccttta
aagaaccctttttacgataacactgacaatccatacaccaggtggcttgcaactaccgac
accattcaatactcattgcacggtctatctgcaacctctcaggactcgtccgctaaatct
cctgagccgtcagcagacgagtcacccgacaacgacaaggaaacttcgagcagcggcagc
gactccggtaagaagcgcaagcggcgagttctgttctccaaagcgcagacgtatgagctg
gaacgacgtttccgacagcagcgctacctctcagcccccgagcgggagcacctggccagc
ctgatccgtctcacgcctactcaagtgaagatctggtttcagaaccatcgctacaagatg
aagcgagcccgtgcggagaaaggtatggaagtgagccaccttccttccccgcggcgcgtg
gccgtgcccgtgttagtcagggacggcaaaccgtgccacgcgctaaaaactcaggacctg
gcggccacgtttcaggcgggcatcccgttctctgcctacagcgctcagtctctgcagcac
atgcagtataatgcgcattacagcgccgccgccacgccgcacttccccacggcgcacttg
gtgcaaacgcaacagtggacctggtga
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