Ictalurus punctatus (channel catfish): 108270306
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Entry
108270306 CDS
T04658
Name
(RefSeq) YTH domain-containing family protein 2
KO
K20102
YTH domain-containing family protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108270306
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108270306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
108270306
NCBI-ProteinID:
XP_017332352
Ensembl:
ENSIPUG00000011114
UniProt:
A0A2D0RPB8
LinkDB
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Position
9:25298588..25314810
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AA seq
607 aa
AA seq
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MSASSLLGQRPKGQGNKVQNGAVAQKETLNDDEFEPYLNAQPRQSNAYTAMSDSYMPSYY
SPSIGFTYSLNEAAWSTGGDPPMPYLASYGQLSNGEHHYLPDAMFGQSGTLGSNPFLGQH
GFNFFPSGIDFSAWGSSSSQGQSTQSYAYAPSSLGGAVIDGQSPFTANEPLNKAVGMNSL
DQGMAGLKIGAGDMTPKVVGSGLPGGPLNQVSAAPSMPAPSIAPAKVTSWADIASKPAKP
QPKIKTKGTLGGTNLPPPPIKHNMDIGTWDNKGAVPKAATPQQSALPTNGQPPNQASPQP
AAPAGGVPQLPLTNGQLAPPTVPLGQHPQAPNGQPGMAQPQLQGPPPPQQPSQQTRWVPP
RNRANGFGDAAGGASQSPPSAGIGGVSVPPEPHPVLEKLRLVNNYNPKDFDWNPKQGRVF
IIKSYSEDDIHRSIKYNVWCSTEHGNKRLDTAYRSLGGKGPLYLLFSVNGSGHFCGVAEM
RSPVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVP
LEKARQVLKIIAGYKHTTSIFDDFSHYEKRQEEEESVKKVDVQGSDPYSSNPSRSHYRLQ
DRQGRVK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagcagccttctgggacagagaccgaaaggccaaggaaacaaagtgcaaaac
ggagctgttgcccaaaaggagactttaaacgatgatgagttcgagccttatctgaacgct
cagcccagacagagcaatgcatatacggccatgtccgactcctatatgcctagctactat
agcccctccataggattcacctactcgctcaatgaagcggcttggtccacaggtggtgat
cctcccatgccctacctggcctcttatggacagcttagcaatggggagcaccactacctc
ccggacgcaatgtttggacagtcaggaacacttgggagcaaccctttcctgggccagcat
ggtttcaactttttccccagtgggatcgacttctctgcctgggggagcagcagctctcag
ggacagtccacacagagttatgcctacgcacccagctcactcgggggtgctgtgatcgat
ggacagtctccattcaccgccaatgagcctcttaacaaggctgtagggatgaacagtttg
gaccagggtatggcggggcttaagattggggcaggagacatgacgcctaaagttgttggt
tctggactgcctggaggacctttgaatcaggtatcagcagctcccagcatgcctgcacct
tccattgcacctgccaaagtgacatcctgggcggatatcgccagcaagcctgccaaaccc
cagcctaagatcaagactaaaggcaccttggggggcacaaaccttccccctccaccaatc
aaacacaacatggatattggaacatgggataacaaaggggcggtgccgaaagcagcaaca
ccccaacagtcagcactgcccaccaatggacaaccacccaatcaggcctctcctcagcca
gctgcacctgccggaggggtgccgcagcttccccttaccaacggacagcttgcaccccct
actgttccattaggtcagcatccccaggctcctaatgggcagccaggtatggctcaaccc
caacttcaaggcccaccccctccacagcaaccttctcaacagacccgctgggtccctcct
cgtaatcgtgccaatggctttggagatgcagcaggcggggccagtcagtctcctcccagt
gcaggaataggtggtgtcagtgtgccaccagagccgcacccggttcttgagaagctgcgt
cttgtcaacaattacaatccgaaggactttgactggaaccccaagcagggacgcgtgttc
attataaagagctactccgaggacgacatccaccgctcaatcaagtacaacgtgtggtgc
agcacggagcatggaaacaagcggctggacacagcataccgctctctgggcggaaagggt
cccctgtacctgcttttcagcgtcaacggtagcggccatttctgtggtgtggccgaaatg
cgctcacccgtggactacaacacgtgcgccggcgtgtggtcgcaggataagtggaagggt
cggttcgatgtgcgctggatctttgtcaaggacgtgcccaacagccagctgcgtcacatc
cgcctcgagaacaacgagaacaagccagtgaccaactcgcgtgacacgcaagaggtcccg
cttgaaaaggcgcggcaggtgctcaagatcatcgcgggctacaagcacaccacctctatc
tttgatgacttctcgcactatgagaagcgccaagaggaggaggagagtgttaaaaaggtg
gatgtccaggggagcgacccatattcgagtaatcccagccggagtcactacagactgcag
gatcgtcaaggacgtgtcaagtaa
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