Ictalurus punctatus (channel catfish): 108270308
Help
Entry
108270308 CDS
T04658
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00562
Inositol phosphate metabolism
ipu01100
Metabolic pathways
ipu04020
Calcium signaling pathway
ipu04070
Phosphatidylinositol signaling system
ipu04081
Hormone signaling
ipu04082
Neuroactive ligand signaling
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04270
Vascular smooth muscle contraction
ipu04310
Wnt signaling pathway
ipu04371
Apelin signaling pathway
ipu04540
Gap junction
ipu04621
NOD-like receptor signaling pathway
ipu04912
GnRH signaling pathway
ipu04916
Melanogenesis
Module
ipu_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108270308
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108270308
04371 Apelin signaling pathway
108270308
04020 Calcium signaling pathway
108270308
04070 Phosphatidylinositol signaling system
108270308
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108270308
04081 Hormone signaling
108270308
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
108270308
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108270308
09152 Endocrine system
04912 GnRH signaling pathway
108270308
04916 Melanogenesis
108270308
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108270308
04270 Vascular smooth muscle contraction
108270308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270308
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
108270308
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108270308
Endocytosis
Macropinocytosis
Phospholipase C
108270308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
C2
Motif
Other DBs
NCBI-GeneID:
108270308
NCBI-ProteinID:
XP_017332356
Ensembl:
ENSIPUG00000004881
UniProt:
A0A2D0RPC5
LinkDB
All DBs
Position
9:19895236..19938497
Genome browser
AA seq
1183 aa
AA seq
DB search
MAKAYEFNWKRPVPHFMQEGEYFDRFDEDPFVFEPHCFFRVDAFAFFITWKSEGKEGQVL
ECSLINSIRNANVPKDPKILSAIETTGKSESDLEGRIICICSGTDLVNLSSMYIVAPTII
IAKQWTDSLRLLIHNTRANNVCPMTCLKKHWMKLSSLTNVSGKIPVRSITRTFASGKTEK
VIFQALKDLGLPSGKNDEIEPDIFTFDKFYSLTQKICPRTDIEALFKKLCGDMSDYLNID
QLVSFLNENQRDPRLNEILFPFYDPERARQIIETYETDEKLRMKGVMSCDGFCRYLMSDE
NAPVFLDRLELYQEMDHPLSHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDVLFKEVIQAIKETAFVSSEYSVILSFENHCSRHQQYKL
ARYCEDIFGDLLLKQPLEDFPMVPGQSLPSPNVLKGKILIKNRRLKPEVEKKQLDHFRKH
MEAGETNTIMSEDENEEDPGSAELADEAHPERICGSLVINQTNNSEGNMLGARKAGETNV
ADEQALIQSYTYVAATTNIHPYLSSIINYAQAVKFLGFDEAEEKNIHHNMSSFNESVGLG
YLRTNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVALNFQTPDLAMQLNQ
GKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVEVISGQFLSDKKIGTYV
EVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNEEPFVFRKVILPDLAVLRIAVYDDNNKLI
GQRILPLDGLQAGYRHISLRNEGNNPLSLPTIFCNIILKTYVPDGFGAIVDALSDPKKFL
SICEKRTDQMRAMGIETWEIAEVPNDSPKTTKRGKTNHPKAVSPQKMSERHAASVQNPSV
SSRSVSPKPLNMPQVTIDDLKQMKAYIKLVKKQLKDLNALKKKHSEAYTALQRTHCTQVD
KMGTQHEKEKRALDKQFERSSKKVSECNWETRGEMERRIKTVTTDHKTKVKNMVAAQTEE
LAEMTKTHNAENQDLSDQHVLQQCELLRKLMLMTQEQQTQQLTDVHERQSKEMRANQAKS
SMENSKAISQDKSIKNKAERERRIRELNSNNTRKFLIERKKLALDQSKELDQLQKVQLEQ
LEQLDKYNAERLKSQLSASPCHGPNDTAHAYGEHRSEIVPVVP
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcatatgaatttaactggaagaggccggtgcctcacttcatgcaagaaggg
gaatattttgatagatttgatgaggatccatttgtctttgagcctcactgcttttttaga
gtggatgcctttgcattcttcatcacatggaaaagtgaaggaaaggaaggtcaggttctg
gagtgctccttaatcaacagtatacggaacgcaaatgtacctaaggatccaaaaattctg
tcagcaatcgagaccacagggaagtctgagagtgacttggagggcaggatcatctgcata
tgcagtggcaccgacttggttaaccttagctccatgtacatagtggcacctaccattatc
attgcaaagcaatggactgacagcttacggttactgatccacaacacccgtgcaaacaat
gtgtgcccgatgacctgtctcaagaaacactggatgaagctgtcatctttgaccaacgtg
agcggtaaaatcccagtgagaagcataacaagaacttttgcttctggcaaaactgagaag
gttatattccaggcactaaaagaccttggtctgcctagtggaaagaatgatgaaattgag
cctgatattttcacctttgacaagttttactccctcactcagaagatttgccccagaact
gacattgaagcactgtttaagaaactctgtggagatatgagcgattatttaaacatagac
cagttagtcagctttttgaatgaaaaccaacgggaccctcgacttaatgagatacttttt
ccattttatgaccccgaacgtgcaaggcaaatcatagaaacctacgagactgacgagaag
cttagaatgaaaggagtgatgtcttgtgatgggttttgtcggtacctgatgtctgatgag
aacgcaccagtgtttcttgaccgactggagctctatcaggagatggaccacccactttca
cattacttcatcagctcctcccacaacacgtacctgactggcaggcagtttggagggaaa
tcttctgtggagatgtaccggcaggtcctgctctccggctgcaggtgtgtggagctggac
tgctgggatggaaagggagaggaccaagaacccattattactcatggcaaggccatgtgc
acagatgtgcttttcaaggaggtcattcaggccatcaaagaaactgcatttgtgtcttcc
gaatactctgtgattctctcctttgagaaccactgctcgaggcatcaacagtataagttg
gcccgatactgtgaggacatttttggagatttgctcctcaagcaacctttagaagatttc
ccaatggtgcctggacagtctttgccttcaccgaatgttcttaaaggaaaaatcctcatt
aagaacagaagattaaaacctgaagttgaaaagaagcaactggatcacttcaggaagcat
atggaagctggagagacaaacactattatgtcagaggatgagaatgaggaagatcctggc
tctgcagagcttgcggatgaggctcacccagaacggatatgtggaagcctcgtcattaac
cagacgaataatagtgaaggaaatatgcttggggcaagaaaggctggtgaaacaaatgtg
gctgatgagcaagctttgatccagtcttacacatatgttgcagcaaccactaatattcac
ccctacctgtccagcattataaactatgctcaggctgtgaaattcctaggatttgacgaa
gctgaagagaagaacatccaccacaacatgtcttccttcaacgagtcagtaggattggga
tacttacggaccaacgctattgaatttgtcaattacaacaagcgccagatgagtcggatc
taccccaaaggaggcagagtggactctagtaattatatgcctcagatattctggaatgcc
ggctgccagatggtagctctgaacttccagaccccagatttggcaatgcagttgaaccaa
ggaaagtttgagtacaatgggtcatgtggttatttgctgaagccagatttcatgcgtcgg
ccagaccgcacgtttgaccctttctcagagacccctgtggatggagtgattgcagccact
tgcagtgtcgaggtaatttcaggccagtttttgtctgacaagaagattggcacatatgtg
gaggtggatatgtatggcctgcccacagacaccattcgcaaggagtttcgcacaaggatg
gtgatgaacaatggtctaaaccctgtatacaatgaggaaccgtttgtttttagaaaggta
atccttccggaccttgcagtgcttagaatagcggtgtatgatgacaacaataagctgatt
ggtcagaggattctccccttggacggtctgcaggctggctacagacatatctccctacga
aatgagggcaacaatcccctttccttacccaccatcttctgcaacatcatcctcaaaaca
tatgtgcctgatggatttggagccattgtggatgctctttctgacccgaaaaagttctta
tccatttgtgaaaagagaacagaccaaatgagagccatgggcattgagacgtgggagata
gctgaggtgccaaatgacagcccaaagacaactaagagaggaaagacaaatcatcccaaa
gctgtgtcacctcagaaaatgtctgagcgacacgctgcatcagtacagaatccgagcgtt
tcctcaagaagtgtgtctcctaaaccattaaacatgcctcaagttaccattgatgacctg
aaacagatgaaggcatatataaaactagtaaaaaagcaactgaaggatcttaatgcattg
aagaaaaagcattcagaggcatacactgcattgcagagaactcattgtactcaggtggac
aagatggggacacagcatgaaaaagaaaagcgggcactagacaaacaattcgaaagaagt
agcaagaaagtcagtgaatgtaactgggaaaccagaggggaaatggagaggaggataaag
accgttaccacagaccacaaaacaaaggtgaagaatatggttgctgctcaaacagaggaa
ttggctgagatgacaaagacccacaatgctgagaaccaggacctcagtgaccagcacgtg
ctacagcagtgtgaactgctcagaaagttgatgctgatgacacaggaacagcagacacag
cagctcacagacgttcatgagcgacagagtaaggagatgagagctaaccaggcaaagtca
tcaatggagaacagtaaagccatcagtcaggacaaaagcatcaaaaacaaggctgagaga
gaacggagaattcgagaactgaacagcaacaacacaagaaaatttctcatagaaagaaaa
aagcttgccttggaccagtcgaaagagcttgatcagctccagaaagtccagcttgaacaa
ctggagcagctggataaatataatgctgagcgcttgaagtcacaactttcagcatctcca
tgccatggcccaaatgacacagcacacgcatatggagaacacagaagtgaaatagtccca
gtggtgccctaa
DBGET
integrated database retrieval system
