KEGG   Ictalurus punctatus (channel catfish): 108270329
Entry
108270329         CDS       T04658                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108270329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108270329
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108270329
Spliceosome [BR:ipu03041]
 Complex B
  Other components
   Prp19 complex
    108270329
 Complex C
   Prp19-CDC5 complex
    108270329
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108270329
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 108270329
NCBI-ProteinID: XP_017332390
Ensembl: ENSIPUG00000004377
UniProt: A0A2D0RR20
LinkDB
Position
9:complement(19531412..19547620)
AA seq 804 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEDTTDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSMEQYDPLEPDFK
RLRQQHLDGELRNEKEERERKKDKQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNSSMALRTPQTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTMLSTPFRTPSHGA
EGLTPHSGMTPKPSIGVTPGRTPLRDKLNINAEDGVVDYADPAYAKHLQRESREHLKLGL
MSLPLPKNDFEIVLPENAEREMEEPEVDESYVEDAADIELCKQAVREAEREKELRQRHTP
VQRNLPRPSEVNETILRPQNVEPPLTELQLAEELIKKEMITMIHYDSLHHPYTEVLAKKA
KGAGSGSTSTEHVAYLEKSPYEKVAEEDLKKAKELLRQEMEVVKHGMGHGDLSIDAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKKLEVNRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLSDLWDQVEQAHMELHTFQELKKQEDMAIPRRKEALREDVQRQQDR
EKELQQRFADLLLEKETLLSSEKF
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggtggcgtttggcgcaacactgaggatgagatccttaaa
gcagctgtaatgaaatatggcaaaaatcagtggtcacgtatcgcctctctgctgcacaga
aagtcggctaaacagtgtaaagctagatggtatgaatggctggatcccagcattaagaaa
acagaatggtcacgtgaagaagaggagaagctccttcatttggccaagctgatgcccacc
cagtggagaacgatagctcccatcatcggcagaaccgcagcacagtgcctggagcactat
gagtatcttctagacaaagctgcccaaagagacaacgaagaagacacgaccgatgatcct
cgcaagctcaagccaggggagatcgacccaaaccctgaaaccaagccggccaggccagac
cctgtggacatggatgaagatgagttggagatgttgtctgaggccagggctcgtttagca
aacacacaaggaaaaaaggccaagcggaaagccagggagaagcagctagaggaggcgagg
cgcttggcagccctgcagaagcgcagagagttgcgtgctgccggcatagatattcagaag
aagcggaagaaaaagcggggtgttgactacaatgctgagattccctttgaaaaaaagcct
gctccgggattttacgatacatctatggagcagtacgatccactcgagcctgacttcaaa
agacttcgccagcagcatcttgacggagagctgagaaatgagaaagaagagcgtgagcgt
aaaaaggataaacagaagatcaagaagaagaaggagtccgaccttccctctgccattttg
cagactagtggggtgtcagagttcacgaaaaaaaggagcaagctagtgctgcctgcacca
cagatatctgatgctgaactggaggaggtggtgaaacttggccaagccagcgaaatcgct
cgtcaaaccgctgaagagtctggaatcacaaactctgcttccagcgctctgctttctgag
tacaacgtcaccaatagcagcatggccctgcgcacaccccagactcccgcagcacaggac
aagattctacaggaagcccagaatctgatggcgcttactaatgtggacacccctctgaag
ggtggtctaaatactcctttgcatgagagtgatttctccggggtcaccccacagaggcag
gtggtccagacccccaacactatgctctctacacctttcagaactcctagtcatggtgcc
gagggtttgacccctcacagtggcatgaccccaaagccttcaataggagtgaccccaggt
cggacgcccctgcgggacaaactcaacatcaatgctgaggatggtgtggtggattacgca
gatccagcttatgccaaacacttgcaacgggagtctcgcgagcacctgaagttggggcta
atgtctcttccactgcccaagaatgactttgagatcgtgctgcctgagaacgctgagagg
gagatggaagagccagaggtggacgagagctatgtggaggacgcagctgatattgagctc
tgtaaacaggcagtcagagaagctgagcgagagaaagaactgaggcagagacatacacca
gtgcagaggaatttacccaggccctcagaggtaaatgagactattctgaggcctcagaat
gtggagcctcctctcacagagctgcagctggcagaggagctcataaagaaagagatgatc
accatgatccactatgatagtctgcaccatccatacacagaagttctggctaagaaagct
aaaggagcaggctcaggttctaccagcactgagcatgttgcctacctggagaaatcgccc
tacgaaaaagtggcagaggaggacctcaaaaaggctaaagagttactgcggcaagagatg
gaggtggtgaagcatgggatgggtcatggtgatctttccattgacgcctataaccaagtt
tgggaggagtgttacagccaggtgctgtacctacctggacagagccgatacaccagagcc
aatctggccagcaaaaaagacaggattgagtctctggaaaagaaactggaggtcaacaga
gggcacatgacaacagaggctaaacgggcagctaagatggagaagaagatgaagattctt
ttggggggataccagtctcgggccatgggtctgatgaagcagctcagtgacctgtgggac
caggtggagcaggcccacatggagttgcacaccttccaggagctgaagaagcaggaggac
atggccattccacgcagaaaggaggctttaagagaagatgtgcagaggcaacaggaccga
gagaaggagctccagcagaggtttgctgatctactccttgagaaggaaactttgctttct
tcagagaagttctga

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