Ictalurus punctatus (channel catfish): 108270364
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Entry
108270364 CDS
T04658
Symbol
rnf144aa
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108270364 (rnf144aa)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108270364 (rnf144aa)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108270364 (rnf144aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108270364
NCBI-ProteinID:
XP_017332458
Ensembl:
ENSIPUG00000023528
UniProt:
W5UJX1
LinkDB
All DBs
Position
9:complement(12878140..12915967)
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AA seq
293 aa
AA seq
DB search
MTTARYRPTWDLALDPLVSCKLCLGEFPLEQMTTITQCQCVFCTLCLKQYVELLIKEGLE
TAISCPDSACPKRGHLQENEIECMVASEIMQRYRKLQFEKEVLLDPCRTWCPSSSCQAVC
QLKEADSARPQLVRCGNCTLEFCSACKASWHPGQECQENLPITAFLPGESSSFFKSDDDD
APIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLGHS
RASVIWHRTQVIGIFAGFGLLLLVASPFLLLATPFVLCCKCKCSKGDDDPLPT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctcgctataggcccacctgggacctggctctggacccgctggtatcctgt
aagctgtgtctaggagagttccccctggagcagatgaccaccataacacagtgtcagtgt
gtgttctgcacgctgtgcctgaagcaatatgtggagcttctcattaaagaaggccttgaa
actgctattagctgtccggattccgcctgtccaaaacgaggacatttacaagaaaatgag
attgagtgcatggtggcgtcagagataatgcagagatacaggaagctgcagtttgaaaaa
gaggtgctgttggacccgtgccggacatggtgcccgtcatcatcgtgccaggccgtgtgc
cagctgaaggaggcggactcggcccggccgcagctggtacgctgtggtaactgcacgctg
gaattctgctcggcctgcaaggccagctggcacccaggccaggagtgtcaggagaacctg
cccatcaccgcctttctgcctggcgagagcagttctttctttaagagtgatgacgatgat
gctcccatcaagcgctgtcccaaatgtaaagtgtacattgagcgagatgaaggttgtgcc
cagatgatgtgcaagaactgcaagcatgctttctgctggtactgcctggaatctctggac
gatgacttcctcctgatccattacgataaaggaccctgccgcaacaagctgggccactcc
agagcctccgtgatttggcacagaacgcaggtcattggtatctttgctggtttcggcctg
ctcttgctggtagcctctccgttcctgctgctggccacaccgttcgtgctgtgctgcaag
tgtaaatgcagcaaaggggatgatgacccattaccaacttaa
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