Ictalurus punctatus (channel catfish): 108270382
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Entry
108270382 CDS
T04658
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108270382
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
108270382
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
108270382
NCBI-ProteinID:
XP_017332500
Ensembl:
ENSIPUG00000023721
UniProt:
A0A2D0RRB7
LinkDB
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Position
9:14452560..14468075
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AA seq
1309 aa
AA seq
DB search
MAALLESLLRRDVELCSALNWLRAQTDCNGDQDLLLTVRKYEFVPFLLNFLRDQSSNTLT
HGPSTPAKTPSTTRSLRAQSSCNERRASNRTSASQGSRSASRVQLFSPAPSTPQADNPSE
QDSPLTVSQSLAGISAFSSPSFSSGWSPAPRHVTSERRSAQRHCLADFMTSPPDTQASPT
FQPHRGRRRSGGFGTSASSRHTGARGGHSAEAGGCDVAGRKERGGGRMSDPVSPPTQVEL
NFNNLEDFPPVSVSHATPIATRPSRRINPTPVSAERPNSKPKSCFTSTPLSKPCSPPSIP
ETTGSGQTTGSPLCLQEERELLKKERSKLAQQSSSPLKPGAVVCTPTKSILRSGSKVTPD
PQVPCPDPNKVTHAPELELLAELYCACISENLVPCVFLELFFVLQLLTSRSVSTSEPTEV
CPSVCERKPDSLERTYLGNVHSCVYFAVRVLENQFALLSHLDRCTLRLLAENERVATFSP
ALRDRLARAQDTSTAKVLPSHPTFIHTVSFQPATDNRTNFSSDKAFHIFKKQRDIFYELL
REWEDYHKEPGWEFEAALGHRVRAMVSQLTAAGNHCHFARLFQKQLVQMCKGHRELGSPG
DAPDADLLGMVGADSLGRLKRLQERLIQPQALSGPCPPPSFPGHQEFFRDFLQIASCCQL
NQHLKDGLCQQLLQLNEVSILGADDSSTTGEEGGDGDMEQQDEKQRFSSVLLLARLLAKF
LGFISFMPYQTSEAPSREIQEAAIALRSKSAPALDVSAVLISCVRRKRTVLTVPWLVEFL
SMLDYTGPFLPCYRTALGILLQIYRRMRLGKDGEQCYLNQMLLVAVLGWLFQIPVFPEDL
FFSINVQEIEDLESHTSSQGLDNLPLVDQQLLYTCCPYLGEFRKLLAAFVSGSASKAGGL
IRKITPTSAEPRGSPTTRSQQKLQLDLEQAFFHNQPASLKRTVEFVAERVGSNCVKHIKA
TFVSELVQGGEKTLREGLGSDNVNAAKLNDPICAQLCDAGMQALEKATRFCSENAPRAVR
VLLPDETSRAVLTTAESITTRLATEKACSWLSSNITTLIKREWKSTFERAMKNVPCPAST
ESVDARGSGKSVQTQKSSSGQDAVSSCPQDCSHKGPLASDVINEIKEVLSIAVGPRSEDE
VCTVQQIDSLLDKVRQTLRCRKFMSSVAEQMMLRCTVLLACKLVSGELPLVSSAGDNRKE
ADVGPLLNELVVLWMCVSSGSVTLHLLYNEPTLTAIINASDLQRYNYLLFVRTLIEKGLL
REEEVGSHWAKLSELSFPGESIEKFQKLPLASPQPVPLVKSSDMLQISQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgttgctccggagagatgtggagttgtgcagcgctttgaac
tggctgcgagcacaaactgactgtaacggagaccaagatctgctgttgacagtaaggaag
tatgagtttgtgccgttcctcctgaacttcctgagggatcagagcagtaacactctgact
catggccccagcaccccggccaagacacccagcaccaccaggtcactccgagcccagagc
tcctgtaacgagcggagagcatcaaacagaacatccgcaagccaaggttcccgcagtgcc
agccgagtccagctcttctcgcctgctccctccacaccgcaagcggacaacccaagcgag
caggacagtccgctgacggtgtctcagagtctggctggtataagtgctttcagcagcccg
tcgtttagctcgggatggagtcctgcccctagacacgtgacatctgagcgtcgatctgct
cagcgccattgtcttgctgactttatgacctcaccaccagacacacaggccagccctacg
tttcagccacatcgagggcgcaggagaagcggcggcttcggaacgtctgcatcaagtcgt
cacacaggagcgcgtggtggtcattcggctgaggctggcggctgtgatgttgcaggaagg
aaggaaagaggtggagggaggatgagtgatccagtgtcacctcctacacaagtagagctc
aacttcaacaatttggaggattttcccccagtgagtgtgtctcatgccacccctatagca
acaagaccgtcgcggcgcatcaacccaacaccagtaagtgcagaacgaccaaactctaaa
cccaagagctgctttacctctacacccctcagcaagccatgtagtcctccttccatcccg
gagaccacgggttctgggcagactactgggagcccactttgtctgcaagaggagagggag
ctactaaagaaagaaaggtctaaacttgcacagcagagcagctccccactgaagcccggt
gcagttgtttgtactcccaccaaatcaatattgaggtcaggctcaaaggtgactccggat
ccccaggtgccctgccctgaccctaataaagtgactcatgcaccagaacttgagctttta
gctgagctgtactgtgcatgcatttcagagaacttagtgccatgtgtgttcctggagctg
ttctttgtgctgcaactgctgacttcacggagcgtgtcaacctctgaacctacagaagtg
tgtcccagtgtgtgtgaaagaaagccagattctcttgagagaacctatctggggaatgtc
cacagctgtgtgtattttgcagtgcgagttctggagaatcagtttgctttgctttcgcac
ctggaccgttgcacactgcgcctcctggcagagaatgaaagagttgccactttctcccca
gccctgcgagatcgcctggcacgagctcaagataccagcacagctaaggtactacccagc
caccccaccttcattcatacggtgtcgttccagccagccactgacaaccgaactaacttc
agcagtgataaagccttccatatctttaagaaacaaagagatattttttatgagctgtta
agagagtgggaagattatcataaggagccaggctgggagtttgaggcagcactaggccac
cgggtcagggcgatggtcagtcagttgactgcagcaggaaaccattgtcactttgccagg
cttttccagaagcagctggttcagatgtgtaagggccacagggagctcggctctcctgga
gatgctccagatgcagatctgctgggcatggtgggggcagacagcctggggagactgaag
cgcctgcaagagcgtctgatccagccgcaggctctaagtggcccttgccctccaccctct
ttccctggacaccaggagttcttcagagatttcctacagatagctagctgctgccagctg
aaccaacacctgaaggatggtttgtgtcagcagctcctgcagttgaatgaggtgtctatc
ctgggcgctgacgactcctcaaccacaggagaggaagggggtgatggagacatggagcag
caggatgagaagcagcgattctcttcagtactccttctggctcgacttcttgccaagttc
ctgggcttcatctcctttatgccttaccagacctctgaggcaccatccagagagatccag
gaggctgccatcgctctgcgcagtaagagcgccccagcgctggatgtctctgcagtgttg
ataagttgtgttcgcaggaagcgcactgtgcttactgttccctggctggttgagttcctc
tccatgctggattacaccggcccatttctgccctgctacaggactgctctgggcatccta
cttcaaatctacaggaggatgcggttgggtaaagatggagagcagtgttacttgaatcag
atgttgttggtggcagtgctgggttggcttttccagatcccagtctttccagaggatctt
ttctttagcatcaatgtgcaggaaatagaggacctggagagtcacactagcagtcagggg
ctggacaatctgcccttggtggatcagcagcttctctatacctgttgcccatatttaggg
gagtttcgcaagctgttggcagcttttgtgtcaggaagtgcgtccaaagctggaggcttg
atccgcaagatcacgcctacgtctgctgagcccagaggttcccccaccacccgctctcag
cagaagctacagctggacctggagcaggccttctttcataatcaacctgcttcacttaaa
cgtactgtggagtttgtggccgaacgagtcggatccaactgtgtcaaacacatcaaggcc
acgttcgtgtctgagctggtgcagggcggagagaagactctcagggaaggtttgggttca
gataatgttaacgcagccaagctgaatgacccaatctgtgctcagctttgtgacgcgggc
atgcaggccttggagaaagccaccaggttttgcagtgagaatgctccaagagctgtaagg
gttcttttgcctgatgagacatctcgagctgttctcacaacagctgaaagcatcaccaca
cgtctggcaactgagaaagcctgcagctggctctcctccaatattacaactcttataaag
agggagtggaaaagtactttcgaacgggcgatgaagaatgtgccgtgtcctgcgagcacc
gagtctgtggacgcaagaggatctggtaagagtgtccagacacagaaaagctcttcagga
caggatgctgtgtcctcatgcccacaagattgctcccacaaaggtccgctggcatcagat
gttattaacgagataaaggaggtgctgagcatcgcagtagggcccaggtctgaagacgaa
gtgtgtacagttcaacagatcgactcactgctagataaagtgagacagacactaagatgt
agaaagttcatgtcttcagtagctgagcagatgatgttgcgttgcactgtcttgttggcc
tgcaagctagtttctggagagctacccctggtgtcctcagctggggataacaggaaagaa
gccgatgttggacctttattgaatgagttggttgttctgtggatgtgtgtttcctctggc
agtgtgactttgcaccttctctacaatgagcctactctcaccgccattatcaacgccagt
gaccttcagagatataactatctgctcttcgttagaacgcttatagagaaaggccttctg
agagaggaagaagtgggctctcactgggcaaagttatcagagttatcttttccaggggaa
tccattgagaaatttcagaagctgcctctggcctctcctcagccagtgcctttagtgaaa
tctagtgacatgctgcagatctcccagtga
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