Ictalurus punctatus (channel catfish): 108270393
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Entry
108270393 CDS
T04658
Name
(RefSeq) DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108270393
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108270393
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108270393
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108270393
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108270393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_lid
MCM_OB
Mg_chelatase
AAA_5
AAA_3
MCM_N
AAA
AAA_16
FtsK_SpoIIIE
Sigma54_activat
AAA_22
Motif
Other DBs
NCBI-GeneID:
108270393
NCBI-ProteinID:
XP_047013711
Ensembl:
ENSIPUG00000004568
UniProt:
W5UD94
LinkDB
All DBs
Position
9:19733582..19746644
Genome browser
AA seq
852 aa
AA seq
DB search
MNSHGAGRSSWRGGGRSWRGGKSAESGGSNGWRGGGRGNGGKSRGWRGRTWGRGGGNYSP
NNTQRGAGISSPVPRTTQATLDITCPYKGWRLYFTEGFIESSPYVEKIKAFEKYFTSQID
LYNKDEIERKGSILVDYKDLLVNKQTSTAVPDLAHELKDMPEKILDCLGLAIHQVLTKDL
EKHADELQAQEGLPAGATPIINIPHISARIYNYEPLTHLKMLRANLYGKFVAIRGTVVRV
SNIKPICTKMAFICNMCGDTQSLALTDGKYNVPTKCLQRECRGRSFTPNRSSPLTLTVDW
QTIKVQELISDDQRESGRIPRTIECELTQDLVDSCVPGDMVTITGVIKVSNEEGFGRNKK
DKCMFLLYIEANSLSNSKGQKTKSVSEPEGQETSVEFSLKDLYAIQEIHAQEDLFKLIVN
SLCPAIYGHLLVKAGLVLALFGGCHKYVDDKNRIPIRGDPHMLVVGDPGLGKSQMLQAVC
NVAPRGIYVCGNTTTTSGLTVSLSRDSGSGDYALEAGALVLGDQGICCIDEFDKMGNQHQ
ALLEAMEQQSISLAKAGIVCTLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFD
LVFILLDTPNEDHDHMLSEHIMAMRAGKKGMISGLTATRGCTHESNISILEIPSNKPLSD
SLKVLPGETFDPIPHQLLRKYVGYARHYVHPSLSAEAAQVLQDFYLELRKQNQSADSTPI
TTRQLESLIRLTEARARLELREKATQSDAEDVVEIMKHSLTDTYSDEFGRLDFDRSQLGS
GMSNRSKVKKFVAALNQIAERTHKTLFEFQHLRQLAKDLHVQVIDFEGFISALNEQGYLL
KKAHRTYQLQTI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccatggagccgggagaagttcctggagaggtggaggacgttcctggagaggt
ggcaaaagcgcagagtctggtggaagtaatggatggagaggtggaggaagagggaatgga
ggaaaaagcagaggctggagaggtcgtacgtggggaagaggagggggaaattattcaccc
aataacacacaacgtggtgcagggatttcttcaccagttcctcgtacaacccaagcaaca
cttgacataacttgtccttacaaaggatggaggctctactttacagaaggtttcattgaa
tcttcaccttatgttgagaagataaaggcatttgaaaaatacttcacttcacaaatcgat
ctttataacaaggatgaaattgaaagaaaaggcagcatcttggtggactacaaagacttg
cttgtgaacaaacagacttccacagcagtacctgatcttgctcatgagcttaaagacatg
cccgaaaagatactggactgcttgggcctagccattcatcaagtgttgacaaaggatctg
gaaaagcatgctgatgagctacaagcccaggaagggcttcctgcaggggcaacccctatt
attaacataccacacataagcgctaggatttataattatgagcctctcacccatttgaag
atgctcagagccaatttatacggcaagtttgtggctattagagggactgtggtgagagtg
agcaacatcaaaccaatttgcactaagatggcgttcatctgtaacatgtgtggagacact
cagagtctggctctgactgatgggaagtacaatgtacccactaagtgtcttcaaagagaa
tgccgtggacgatcttttaccccaaacagaagttcaccactaacgctgaccgtcgactgg
cagactataaaggttcaggagctgatatcagatgaccagcgtgaatcagggcgtattccc
cggaccattgagtgtgaactcactcaggatttggtggacagctgtgtaccaggagacatg
gtcaccatcacaggagttattaaagtgtctaatgaggaagggtttggaagaaataagaag
gacaagtgcatgttccttttgtatatagaagcaaactctctcagtaactcaaaagggcaa
aaaaccaagtctgtgtctgaacctgaaggccaggagacatcagtagagttttcgctcaaa
gatctgtatgccatccaggagattcatgcacaagaggacctctttaagttaattgtgaat
tctctttgtccagccatctatgggcatctgcttgttaaggcaggattagtcctggcttta
tttggaggctgtcataaatatgtggatgataagaaccgaatccctataagaggagaccca
cacatgcttgtcgtaggagatcctggacttggcaaaagtcaaatgttacaggcagtatgc
aacgtcgccccacgtggtatctacgtttgcggaaacaccaccaccacctcaggcctgact
gtctctctgtccagggacagtggctctggagactatgcactagaagctggagctttagtg
ttaggagatcaaggtatctgctgtattgatgaatttgataagatggggaatcagcaccag
gccttgttggaagctatggagcagcaaagcataagtttggccaaagctggaattgtctgt
actcttccagctcgcacctccatcattgcagcagctaacccagtggggggacattacaat
aaggctaagacagtatctgaaaacctgaaaatgggcagtgctctgctgtccagatttgat
ctggtctttattcttctggacactcccaacgaggaccatgaccacatgctctcggaacac
atcatggcaatgcgtgcagggaagaaaggcatgattagcggtttaacagccaccaggggc
tgcacacatgagtccaacatatccattctggaaattccctcaaacaagcctctttcagac
agcctgaaggttcttcctggagagacttttgacccaattcctcaccagctgctgcgtaaa
tatgtaggctacgcccggcattatgtgcaccccagtctctcagccgaagctgctcaggtc
ctacaggacttctacctggagctgcgaaagcagaaccaatcagccgatagcaccccaatc
acaactcggcagctagagtccctcatccgcctcactgaggcaagggcacgtcttgaactt
cgagaaaaagctactcaaagtgatgcagaggatgtggtggagatcatgaaacacagtttg
acagatacgtactcggacgaatttggtcggctggattttgaccgatctcagcttgggtct
gggatgagcaacaggtcaaaagtcaagaagtttgttgcagctttgaaccaaatcgctgag
cgcacccacaaaaccttgtttgaatttcagcacctgcgacagctggctaaagacctccac
gttcaggttattgattttgaaggctttatcagcgcactcaatgaacaaggctacctgcta
aaaaaagcacacagaacataccagctgcaaaccatctga
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