Ictalurus punctatus (channel catfish): 108270433
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Entry
108270433 CDS
T04658
Symbol
rragd
Name
(RefSeq) ras-related GTP-binding protein D isoform X1
KO
K16186
Ras-related GTP-binding protein C/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu04142
Lysosome biogenesis
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108270433 (rragd)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108270433 (rragd)
04140 Autophagy - animal
108270433 (rragd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
SRPRB
MMR_HSR1
Ras
AAA_14
Ubiquitin_UBP8
Motif
Other DBs
NCBI-GeneID:
108270433
NCBI-ProteinID:
XP_017332618
Ensembl:
ENSIPUG00000005270
UniProt:
A0A2D0RQ31
LinkDB
All DBs
Position
9:complement(1306113..1320383)
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AA seq
436 aa
AA seq
DB search
MWQSRAASGLFTRNCTKLRRRRRRRRRRRRRRRRRRREKMTDQGKQYSTVVEHDEALSFG
YYDEDDDDDGLETFTEDGVCGCDEGGLGFRDPFCSEVKPRILLMGLRRSGKSSIQKVVFH
KMSPNETLFLESTNKICREDVSNSSFVSFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFV
IDSQDDYVEALSRLHLTVTRAYKVNPDINFEVFIHKVDGLSDDHKIEKQRDIHKRANDDL
ADAGLERIHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFD
VVSKIYIATDSSPVDMQTYELCCDMIDVVIDISCIYGLSEDVAGSPYDKESMAIIHLNNT
TVMYLKEVTKFLALVCFLREESFERKGLIDYNFHCFKKAIEEVFDLRLKVQRNRKLLSRR
RWSEQSVPNGTHVQHH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaagtcgggctgcgtccggactttttacacgaaattgcactaaacttagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagagagaaaatg
acagaccaggggaagcaatacagcacagtagtcgagcatgatgaagccctgtcgtttggg
tattatgatgaagatgacgatgatgatggtttggagacgtttacagaggatggagtgtgc
ggctgcgatgaaggagggttgggtttccgagatcccttctgcagtgaggtgaagcctcgc
atcctgctgatgggtttacggcgcagcggcaagtcttccatccagaaagtggtcttccac
aagatgtcccccaacgagaccctgttcctggagagcaccaataagatctgcagagaggac
gtgtccaacagctcgttcgtcagcttccagatctgggactttcccggtcagatcgatttc
ttcgaccccaccttcgactacgagatgatcttccggggaacgggagcgctcattttcgtt
atcgactcgcaggatgactacgtggaagcattgagcagactccatctcaccgtgactcga
gcctacaaggtcaacccggacatcaacttcgaggtgttcatccataaagtggacgggttg
tccgacgatcacaagatcgagaagcaaagagatatacacaaacgcgccaacgacgacctg
gcggacgccggcttagagaggatacatttaagcttctacctgacgagcatctatgatcac
tccatcttcgaggcgttcagtaaagtggtgcagaagctcattccgcagctcccgacgctg
gagaatctactcaacatttttatttctaactcggggattgaaaaggcgttcctgttcgac
gtggtcagtaagatctacatcgccacggacagcagtccggtggacatgcagacgtacgag
ctgtgctgtgacatgattgacgtcgtcatcgatatttcctgcatctatggcttgagtgag
gacgtagccggttcgccgtacgataaagaatccatggccatcatccacctcaacaacacc
acagtgatgtacctcaaagaggtcaccaaattcctggcgctcgtctgtttcctcagggaa
gagagttttgagaggaaaggactcatcgactacaacttccactgcttcaagaaggccata
gaggaggtgttcgacttgcggctgaaagtgcagagaaaccgtaaacttctgagccggagg
aggtggagcgagcagagcgtgccgaacgggacacacgttcagcaccactga
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