Ictalurus punctatus (channel catfish): 108270506
Help
Entry
108270506 CDS
T04658
Name
(RefSeq) C-C chemokine receptor type 4
KO
K04180
C-C chemokine receptor type 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03260
Virion - Human immunodeficiency virus
ipu04060
Cytokine-cytokine receptor interaction
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108270506
03260 Virion - Human immunodeficiency virus
108270506
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108270506
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108270506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108270506
04050 Cytokine receptors [BR:
ipu04050
]
108270506
04090 CD molecules [BR:
ipu04090
]
108270506
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Chemokine
CC Chemokine
108270506
Cytokine receptors [BR:
ipu04050
]
Chemokine receptors
CC Chemokine
108270506
CD molecules [BR:
ipu04090
]
Proteins
108270506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
UL78
DUF1240
Motif
Other DBs
NCBI-GeneID:
108270506
NCBI-ProteinID:
XP_017332764
Ensembl:
ENSIPUG00000000582
UniProt:
A0A2D0RQJ1
LinkDB
All DBs
Position
1:4039880..4041804
Genome browser
AA seq
356 aa
AA seq
DB search
MATMYPNVTTDEYSDYGGLDDNFQLCNNTNVSAFNQVFLPSLYSIVFIVGFIGNGLVLCV
LVKYHNRSNVTDVCLFNLALSDLLFLISLPFWAHYAAISEWTFGGFMCHAVTALYMLGFY
GSIFFMILMTLDRYAVIVHAHNSLFSKHRSVRAGIAQALFMWALSLGVSLPTIIFSIVKN
ESNGWICKEEYPEGTAWKLFSYIELNILGLIFPLSVMVFCYSRIIPILMAMKSQRRHKAV
RLILALVIIFFLFWTPYNIVIFLKFLRQLGYMSTCQWEQDLHMATQWVETIAFSHCCFNP
IIYAFVGQKFRTLVLKILKQWFPVCFGRCTTIGSEFSERKGSMSSRSSMISSTKIV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctacgatgtaccccaacgtgacaacagatgaatactctgattacggaggtctagat
gacaacttccagctctgcaacaacaccaatgtaagtgccttcaaccaagtcttccttcct
tccctctacagcattgtcttcatcgtgggattcattggaaatggcctggtgctgtgtgtc
ctggtcaagtaccacaacaggtcaaatgtgacagatgtgtgtctcttcaacctggccctt
tcagacctcctcttcctgatctctttgcctttctgggctcactacgctgccatctctgag
tggaccttcgggggcttcatgtgtcatgcagtgacagcgctctacatgctgggattttat
ggaagtatcttcttcatgatcctcatgaccttggaccgctacgctgtcattgtccatgcc
cataactctctcttctccaagcaccggtctgtcagagctggcatagcccaggctttgttt
atgtgggcacttagcttgggagtttctctgccaaccatcattttctccatagtgaagaat
gaatcaaacgggtggatatgcaaagaggaatatccagaagggacagcatggaagttattc
tcttacattgaactgaacatcctcggcttgatctttcctctttcggtgatggtgttctgc
tactcgcgcatcatccccattttaatggcgatgaagtctcagaggagacacaaagctgtc
aggctcatcctggctttggttattattttcttcctcttctggacgccctacaacattgtc
atcttcctgaagttcctgcgccaattaggctacatgagcacctgtcagtgggaacaggac
ctgcacatggctacgcaatgggtggaaaccatagcgttcagtcactgctgcttcaacccc
ataatttacgcctttgtggggcagaaattcaggactttggttctcaagatactaaaacag
tggtttcctgtttgctttggtcggtgcacaacaatcggcagtgagttctcagagaggaag
ggctctatgtcctcacgctcctcaatgatttccagcacaaagattgtgtag
DBGET
integrated database retrieval system