Ictalurus punctatus (channel catfish): 108270574
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Entry
108270574 CDS
T04658
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108270574
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108270574
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
DUF6779
TSC22
KxDL
Anoctamin
YabA
DivIC
Motif
Other DBs
NCBI-GeneID:
108270574
NCBI-ProteinID:
XP_017332893
Ensembl:
ENSIPUG00000020495
UniProt:
A0A2D0RQV6
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Position
1:24739794..24747603
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AA seq
813 aa
AA seq
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MNSATGGAADPRQADNSIVKQQQRAPSPARFKDATSKTPSKSASAKPASAKQGGKNSRSS
SPVAASAGKDKQTAKGSGAVHPSGAESPTTRRSEKAKKIEERHSSTEDADDPPLKGDRVV
SDQPSSSKSSQSKAKNQRTKDGAASCAKQTANNTVGCGPGFWREGCLQSELIQFHMNKSL
KKEGAMHAKAASSPGNGMELSPEAPLRPIESHVERDLREEIERLNDENDNLKHEIEEMRA
EMEEMRDTFYEEDACQLQDMRRELVRANKNCRILQYRVRKAERKRLRYAETGEIDGELVR
SLEQDLKVAKDVSVRLHNELENVEEKRAKTEEENERLRQQLIEVEVTKQALQNELEKSAS
LKRRGKDAQKSEKRTPQTPTEEENDDLKCQLALIKEEAVLMRKKMAKIDKEKDRLEQELQ
KYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRGLKAE
LDDLRGEELAGGTADPSTREQSKVFSEMRQQLQLVEDEAELLRRNLADMEEQNKRVTAEL
NKLKYKAGSHEGSRHGSAGGDGSKAEALQEELKAARLQINELSGKVMQLQYENRILLSNM
QRYDLASHLGIRPSPRDSDAESDGGRRESDDDSSRLPPHRKREGPIGGESDSEEVRNIRC
LTPTRSLYSPESRFLSRSLKDRQQMIDIRMEAERLSRTIDRLIADTSTIIAEARVYVTNG
ELFGRMDEDDDGSRIREHELLYRINAQMKSFRKDLQSFIDRLDVPKPEDHETEEPLSMFQ
PIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgccactggcggcgctgccgatccgcgccaggcagacaatagtatcgtgaag
cagcagcaacgggcgccctcaccggccagatttaaagacgcgacatcgaaaacgccctcg
aaaagcgcctcagctaaacctgcttcagcaaaacaaggtggtaaaaacagtcgaagcagt
tctccagtggccgccagcgcggggaaagacaaacagacggcgaaaggctcgggcgctgtc
cacccaagtggtgctgaaagtcccaccaccaggcgctcggagaaggccaagaagatagag
gagcgccatagctctacggaagacgcggacgatcctcctttaaagggcgatcgtgtggtg
tccgatcagccgagctcttcgaaatcctcccagagcaaagcgaagaatcagagaacaaaa
gacggggccgcgagctgcgctaaacaaacggctaacaacaccgtgggatgcgggcctggc
ttctggagggaagggtgcttacagtctgagttaatacagttccacatgaataagagcttg
aagaaagaaggggccatgcacgcaaaggcggccagttcgcccggaaacggcatggagctc
tcacccgaggcgcccctcaggcctatcgagtctcatgtcgagcgagatttacgagaggaa
atcgagagactgaatgatgaaaacgataatcttaagcatgaaatcgaagaaatgcgggcg
gagatggaggagatgagagacacgttttacgaggaagacgcgtgccagctgcaggatatg
cggcgcgagctcgttagagccaataagaactgcaggatcctccagtaccgcgtgcggaag
gcggaacggaagcgactgcggtacgcagagactggggagatcgacggggagttagtgcgg
agtctggaacaagatttaaaggtggcaaaagatgtgtctgtgagattgcataatgaactg
gaaaatgtggaagagaaaagagcaaaaacagaggaggagaatgaaagactgaggcagcag
ttgattgaagtggaggtgactaagcaagctttacagaacgagctggagaaatcggcatct
ctgaaacgaagaggtaaggatgcacagaaatcagaaaagaggactccacagaccccaaca
gaggaggaaaatgatgacctaaaatgccagctggccctcattaaagaagaagctgtactg
atgaggaagaagatggcaaagattgacaaagagaaggaccggctggagcaggaactacaa
aagtaccgttctttctatggtgatgtcgacagtcccctccctaagggtgaggctggtggt
ccccctaccacgcgtgagtctgagctgaagctgcgtctccgcctggtagaggaggaggcc
aacatcttgggtcgcaagattgtggagttggaggtggagaaccgtggtctgaaggcagag
cttgatgacctgcgaggagaggaactggcaggaggcacagcagacccctcaacacgggaa
caaagcaaggtgttttctgagatgcggcagcaactgcagctggtggaggatgaggctgag
ctgctgcgccgcaacctggccgacatggaagaacagaacaaaagggtaacagcagagctt
aacaagctgaagtataaggctggctcacatgagggttcccgtcatggtagtgcagggggg
gatgggtccaaggctgaggctctgcaggaagagctaaaagctgctaggctacagatcaat
gagctgagtgggaaagtaatgcagctgcagtacgaaaatcgcatactgctgtccaacatg
cagcgctacgacctggcctcacacctaggcatccggcccagccctcgagacagcgacgcc
gaaagtgatggaggccgcagagaaagtgatgatgactcttcacgactcccaccacatcgc
aagcgcgagggccccatcggtggtgagagcgactctgaagaagtacgcaatatccgatgc
cttactcccactcgctctctatactctcccgagagccgttttttatcccgaagtctcaag
gaccggcagcagatgattgatattcgaatggaggctgaacgtctgagccggaccattgac
agactgatcgctgatacaagcaccataattgccgaagcacgagtctatgtgacgaatggt
gagctgttcggccgtatggatgaggatgatgatggaagccgaatacgtgagcatgagctt
ctgtaccgcattaatgcgcagatgaaatccttcaggaaggatctccagagttttattgac
cgtttagatgttcccaaaccagaagatcatgaaaccgaagagcctctctctatgtttcag
cctatcattttgcttatcctcattcttgttttattctcatctctgtcatatgccactata
ttcaaattggtctttcttttcactcttttctttgttctataa
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