Ictalurus punctatus (channel catfish): 108270609
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Entry
108270609 CDS
T04658
Symbol
rx1
Name
(RefSeq) retinal homeobox protein Rx1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108270609 (rx1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108270609 (rx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108270609
NCBI-ProteinID:
XP_017332925
Ensembl:
ENSIPUG00000025009
UniProt:
A0A2D0RSJ1
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Position
10:14819299..14824796
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AA seq
328 aa
AA seq
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MHLSLDAINMVDDSCPSPGNFHEMVKGAVVSVGTHVHSIDVILGFTKDPVPLLNPGVNAV
PPEVTVESPGDAGKQDHIMHAYGTVSPRDKSELPAFHVPETFSDTCKSERREVWKTAESD
GNSPEQSDVEQPKKKHRRNRTTFTTYQLHELECAFEKSHYPDVYSREELAMKVNLPEVRV
QVWFQNRRAKWRRQEKMDASAVKLHDSPMLSFSRPSMHTSMSPMSNSLPLDPWLASPLNN
TTPMHAIPDFMGSAQGLQAGYQSHSFLNPPQVMNQSVQPMAPPPYQCPPVFTDKFSLEEV
DQRSFSITALRMKAKEHIQSMDKTWQSM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcactagatgctattaacatggtggatgacagctgcccctcgccaggcaac
ttccacgagatggtaaaaggagcggtggtgtctgttgggacccatgtccacagcattgat
gtgatcctgggcttcacaaaggaccccgtgcccttgctcaatccaggagtcaacgctgta
cctcctgaagttactgtggaaagtccaggggatgcaggaaagcaagatcacatcatgcac
gcttatggcactgtgtctccgagagacaaatcagagctgcctgcttttcacgtacctgaa
acattttctgacacatgtaagtctgagcgaagagaggtgtggaaaacggctgagagtgac
gggaattctccagagcagtcggatgtggagcaaccgaagaaaaagcaccggcgaaaccgc
accacattcaccacataccaactccatgagctggagtgtgcctttgagaagtctcactac
cctgatgtgtacagccgtgaggagctcgccatgaaggtcaacctccctgaggtccgagta
caggtgtggttccagaaccgtcgtgccaaatggaggcgtcaggagaagatggacgccagc
gccgtaaagcttcatgactcgcctatgctctccttcagtcgaccatccatgcacaccagc
atgagccccatgagtaactcgctgcccctggacccttggttagcgtctcccctgaacaac
actacaccaatgcatgctattccagacttcatggggtctgcacagggtctgcaggccgga
tatcaaagccacagcttcctgaacccccctcaggtcatgaaccaaagtgtgcagcccatg
gcaccccctccgtatcagtgccctccggtgtttactgataaattctccctggaggaagtt
gaccaacgcagcttcagcattaccgcgctgaggatgaaagccaaggaacatattcaatcc
atggacaaaacatggcagtccatgtga
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