Ictalurus punctatus (channel catfish): 108270648
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Entry
108270648 CDS
T04658
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108270648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108270648
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108270648
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108270648
NCBI-ProteinID:
XP_047014225
Ensembl:
ENSIPUG00000018671
UniProt:
A0A979F2A0
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All DBs
Position
10:complement(1524034..1558262)
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AA seq
745 aa
AA seq
DB search
MDFSEQRDMQRQLHEGAVGVAPRAPGDAVQLPLDVTERKTFCPAEKKSGEIDSNKVYGTF
PTGAPVPPPVPAPHKDASGPFLPQTDKAMSQNNCPSSAKQGAMVVLGTDGTASVQLNRAE
QDDDDDEEGDENKARGNWSNKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIM
LSLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLY
YLFASFTSLKGLLPWSYCTNEWNTAECKDKDMLQLDSCILRDRNITSIKNTTFCLSANAA
GSLSKLLNITTDNRTYVSPSEEYFKYNVLHISKGIEYPGDIRWPLAACLFLAWLIVYASL
AKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLNDAKVWKDAA
TQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMAHEL
KVPIEKVADEGPGIAFVVYPEALTRLPISPFWAIIFFLMLLTLGLDTMFATIETIVTSVA
DEFPKYLRKHKPLFTLVCCVCFYILGFPMITESGMYMLQLVDTYAASYSLVILAIFELIG
ISYIYGLQRFCEDIEMMIGFQPNRFWRMCWAFVTPTILTFILVLSLYQWKVMTYEDYTYP
TWSMVLGWLMVICSVIWIPIMFVIKMYLAPGTIIERLKLVCSPQPDWGPFLMKHRGERYK
NMIDPLGTNSLGLKLPPKDFQLSGP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgagcagagagacatgcagaggcagctgcacgagggcgcggttggagtt
gcccctcgtgccccaggggacgcggttcaattgccccttgatgtcaccgagcgcaaaacg
ttctgccccgcggaaaagaaatcgggagaaatagattccaataaagtgtacgggacgttt
ccgaccggtgcgcccgttcctcccccggttcctgcccctcataaggatgcctccgggccg
tttttaccccaaacggataaagccatgtcgcagaataactgcccctcctccgcgaaacag
ggggcaatggtggttctgggcacagatggcactgcgtctgttcagctcaaccgggcggag
caagatgatgatgatgatgaagaaggtgatgagaataaagcgagagggaactggtccaat
aaactggattttattctctctatggttggttatgctgtgggtttgggaaacgtgtggagg
tttccatatctcgccttccaaaatggaggaggtgcatttttgatcccatacttgatcatg
ttgagtcttgctggaattcccatcttccttctggaagtttctttgggccagtttgccagt
caaggacccgtttctgtatggaaggctattccagctttacaaggttgcgggattgccatg
ttgattatatcagtcttgatagccatatattataatataataatgtgctggactctgtac
tacctgttcgcttcgttcacttcgttgaagggcttattgccatggtcttactgtacaaac
gaatggaacacagctgagtgcaaagacaaagacatgctgcagctagattcctgtatcctt
cgagacagaaacatcacctccattaagaacacgacattttgtttgtctgcgaatgctgct
gggagtttaagcaagctgttaaatatcacaacggataacagaacctatgtcagccccagt
gaagaatatttcaaatataatgtgttgcacatttccaaagggattgagtatccaggagat
atccgctggcccttggccgcttgtctttttctggcatggctcattgtgtatgcttccctg
gctaaaggaatcaagtcatcaggcaaggtggtgtatttcacagccacctttccttacgtg
gttttggtgattttgttgatccgtggtgtgacactgcctggagcaggatccgggattctt
tacttcattacaccgaaatgggaaaaactcaatgatgccaaagtatggaaggatgctgcg
actcagatcttcttctccctctctgcagcatggggagggttaatcactctctcctcatac
aataaatttcataacaactgttatcgggacactataatagtgacgtgtacaaacagcgct
acaagtatttttgctggttttgtgattttctctgtcattggcttcatggctcatgagctt
aaggtgccgatcgagaaagtggcagatgaaggtcctggcattgcttttgtggtttatcca
gaagccctcactaggctaccaatctctccattttgggccatcatcttcttcctcatgctc
ctaacgcttggactggataccatgtttgcgaccatcgagactatcgtgacatcagtagct
gatgaatttcccaaatatctgcgaaagcacaagcctctcttcaccctcgtgtgctgtgtg
tgcttctatattctgggcttcccgatgataactgagagtggcatgtacatgctacagcta
gttgacacctatgcagcctcgtattctcttgtcatcctagccatctttgagctaattgga
atttcttacatctatggcttgcaacggttctgcgaggacatagaaatgatgattggtttc
cagccgaacaggttctggaggatgtgttgggcttttgtaacaccgactattctcacattt
attttggtgctgagtttgtaccagtggaaggtgatgacctacgaggactacacctacccc
acctggtccatggtgctcggctggctcatggtcatctgctctgttatctggatccccatc
atgttcgtcattaagatgtaccttgctccaggaaccatcatcgagcgattgaagcttgta
tgttctcctcagcctgattggggtcctttcttgatgaagcatcgtggtgagcgctataaa
aacatgattgacccacttggaacaaattcattggggctcaaacttcctccaaaggacttc
cagctatctggcccttga
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