Ictalurus punctatus (channel catfish): 108270692
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Entry
108270692 CDS
T04658
Name
(RefSeq) syntaxin-6 isoform X2
KO
K08498
syntaxin 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108270692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270692
Membrane trafficking [BR:
ipu04131
]
SNARE
SNAP-25[C] (Qc)
STX6
108270692
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
FliD_C
Spectrin_Anc-1
Phasin
DUF2970
DUF2207_C
DUF6952
OVT1
Ran-binding
Motif
Other DBs
NCBI-GeneID:
108270692
NCBI-ProteinID:
XP_017333010
UniProt:
A0A2D0RSS7
LinkDB
All DBs
Position
10:14543852..14597769
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AA seq
256 aa
AA seq
DB search
MSMEDPFFVVKGEVQKAVNTAQGLYQRWTELLQDPGSATKEEIDWTTNELRNSLRSIEWD
LEDLDETISIVEANPRKFNLDSVELNKRKAFITSTRQTVKEMKDQMASPMAMSQSDKKSR
KTLMGDGGSRGPIWQPGGDKYTRLDRELQSANSQLIEEQQTQQQFIAEQQDEQLELVSGT
IGVLKNMSERIGQELDEQAVMLDDFGHEIDNTQSRLDNVMKKLAKVSHMTSDRRQWCAIG
ILLAILFVVILLLIVL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggaagacccgttttttgttgtgaaaggggaggtccagaaggctgtgaacact
gcccagggtctgtatcagcgatggaccgagctgctgcaggatcctggcagtgccacgaag
gaggagatcgactggaccaccaatgagctgaggaacagcttgaggtctattgagtgggat
ctggaggacttggatgagaccattagtattgtggaagcaaatccacggaagttcaatctt
gattctgtggagctgaacaagcggaaagctttcatcaccagcacaaggcagactgtcaag
gagatgaaagatcaaatggcaagcccaatggccatgtcccagtctgacaagaaaagcagg
aagactctgatgggagatggagggtctcgtggaccgatctggcaaccaggaggagataaa
tacacacgtctggacagagaactgcaatcagccaactctcaattgattgaggagcaacaa
actcagcagcagttcatagccgagcagcaggatgagcagttggagctggtgtcagggacc
attggcgtattgaagaacatgtctgaacggattggacaagagctggacgaacaggcagta
atgctggatgattttggtcatgaaatcgacaacacccagtccaggttggataatgtgatg
aagaagctggctaaagtttcacacatgactagtgaccggcgacaatggtgtgctattggc
attttgttggctatcctgttcgttgtgatcctcctcctcattgttctgtga
DBGET
integrated database retrieval system
