Ictalurus punctatus (channel catfish): 108270741
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Entry
108270741 CDS
T04658
Symbol
abcb11b
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108270741 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108270741 (abcb11b)
04147 Exosome [BR:
ipu04147
]
108270741 (abcb11b)
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
108270741 (abcb11b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108270741 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_29
Rad17
AAA_15
AAA_16
AAA_30
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
108270741
NCBI-ProteinID:
XP_017333104
Ensembl:
ENSIPUG00000013273
UniProt:
W5UKK6
LinkDB
All DBs
Position
10:complement(5408432..5429339)
Genome browser
AA seq
1348 aa
AA seq
DB search
MPGSVKLRSIKRFGQENDGYEFSAEERDAEYMTMATSKNHKKFKPGQKKEEAAIRVGFFQ
LFRFSTCHEILMMIFGSLCAIIHGAAQPLMLLVFGLLTDTFIDYDIELNELRDPAKHCLN
NTIQWRNLTAEENLELNMTRACGLLDIEYEMTNFAYYYVGIGCSVFVLGYVQISLWVTSA
ARQIKIIRKLYFSKIMRMEIGWFDCNSAGELNTRMSDDINKINDAIGDQVGIFIQRFTTF
VCGFLMGFVRGWKLTLVIISVSPLIGLGAGFMALFVAKLTGWELQAYAKAGAVADEVLSS
IRTVAAFGGEKKEVERYDRNLVSAQRWGIRKGLIMGFFTGYMWFIIFLCYALAFWYGSSL
VVDTQEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPEIDCLS
EAGYKLDKVKGDLEFHNVTFYYPSRPEVKILDKMNLQVKSGETTAFVGPSGAGKSTTVQL
IQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTIAENIRYGKPGVSDSD
IIKAAKDANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATS
ALDNESEAIVQEALDKVQIGRTTISIAHRLSTIKNADVIVGFEHGRAVERGKHDELMDRK
GVYFTLVTLQTQGDKALNQKAKQMEAEAAGEPEAESINLSRAGSYRTSLRASIRRGTKSR
LSNIIPESSVAIAGELGPQSYSESYVSQFSKKGVIPEDDEEEVEPAPVTRILKYNAPEWP
YMVFGTFGAAVNGGVNPVYSLLFSQILATFSMPDPAAQRREIDGICLFFVLVGVTTFFTQ
MLQGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGALTTRLATDASQVQGATG
AQIGMILNSLTNIGVAIIISFYFSWKLSLVIMCFLPFLALSGGFQAKMLTGFAKQDKEAM
EAAGQISGEALNNIRTIAGLGKERSFVEVYEAQLEAPYQAALKKANVYGACYGFAQCVVF
LANSASYRFGGYLVRHEDLHFSLVFRVISAIVTSGTALGRASSYTPDYAKAKISAARFFQ
LLDRHPKISVYSDKGDKWADFRGDIEFIDCKFTYPTRPDIQVLNGLTVSVKPGQTLAFVG
SSGCGKSTSVQLLERFYDPDLGRVLIDGHDSTRINVPFLRSKIGIVSQEPILFDCSIEEN
IRYGDNQRGLSMDDVISAAKKAQLHDFVMSLPEKYDTNVGSQGSQLSRGQKQRIAIARAI
IRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSRGF
VIECGTHDQLMSLNGAYYKLVTTGAPIS
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgccaggatctgtaaagctgcgcagcattaaaaggtttggacaggagaacgatggctat
gagttttccgcagaagagcgagatgcagaatacatgacaatggcgacttcgaagaaccat
aaaaagttcaaaccaggccagaagaaggaagaagcagccatccgcgttgggttctttcaa
ctgttccgcttttccacatgccatgaaatcctgatgatgatttttgggagtttgtgcgct
ataatacacggcgctgcccagccactcatgctgctcgtgtttgggttgctgactgacaca
ttcattgactatgacattgagctgaacgagctgcgagatccagccaaacactgtctcaat
aacaccattcagtggcggaacctcacagctgaggaaaacttggagctcaatatgaccaga
gcctgcgggctattagatatagagtatgagatgactaactttgcttactactacgttggt
attgggtgttctgtcttcgtgctcggatacgtacaaatctctctatgggtgacaagcgct
gcccgacagatcaagatcatccggaagctctacttcagcaaaatcatgagaatggaaatc
ggctggttcgactgcaactctgcgggtgaacttaacacacgcatgtctgatgatatcaat
aagataaacgacgccattggggatcaggtgggaatctttattcagcgcttcaccaccttt
gtctgtggcttcctcatgggatttgtaaggggctggaagttgacactggtcatcatctct
gtgtctccactcattggactgggagctggttttatggctttgtttgtggcaaagctaact
ggttgggagctgcaggcctatgctaaagcaggtgctgtggcagacgaggtcctgtcctcc
atccgtaccgtggcagcattcggtggagagaagaaagaagtggaaaggtatgatcgtaac
cttgtctcagctcagcgctggggcattagaaaaggcctgatcatgggattcttcactggc
tacatgtggttcattatattcctttgttatgcgctggcattttggtatggctccagttta
gtggtggacacacaagaatacagccctggaaccctacttcaggtgttttttggggtgctt
attgccgcattgaacctgggacaagcatctccttgtctggaggcatttgctgcgggcaga
ggagctgctactatcatctttgagactattgaccgtgagccagagatcgactgcctgtct
gaagctggctacaagctggacaaggtgaaaggagatctggaatttcacaatgtgaccttc
tactatccttcgagaccagaagtgaagatcctggataagatgaatctacaggtgaagtct
ggggagactacagcttttgtggggccaagtggggcaggaaaaagcacaactgtacagctc
atccagcgcttttatgaccccaaagagggcatggtcactctggacggtcatgatattcgt
ggtctgaatatccagtggctccgctcactcatcggcattgtagagcaggagccagtttta
ttcgccactaccattgctgagaatattcgctacggaaaacctggtgtatctgacagcgac
atcatcaaagctgccaaagatgcaaacgcctacaactttataatggacttaccacagaaa
tttgacacgctggttggtgagggtggtggacagatgagtggtggccagaaacagcgaatt
gcaatcgctcgagccctggtgcgaaatcccagaatccttctgctggacatggcaacttct
gcacttgacaatgagagcgaagctattgtacaggaagctcttgacaaggtccaaattggt
cgtaccaccatttccattgcccaccgtttatcgacaataaagaatgctgatgtgattgtg
gggttcgagcatgggcgagctgtagagagaggcaaacatgatgagttgatggacagaaag
ggtgtttacttcactctagtcactctacagacccagggagacaaagctctcaaccagaaa
gccaaacagatggaagcggaggctgctggagagcctgaagcagagagcataaatctttct
cgggcaggaagttatcggacaagcctaagggcctccattcgtcgcgggactaaatcccgt
ttgtccaacatcattccagaatcctcagtagcaattgctggggaactcggtccacagtcc
tactctgaatcctatgtttcccagttcagtaaaaagggtgtcattcctgaagatgatgaa
gaggaagtagaaccagctcctgtgactcgaattctgaagtacaacgccccagaatggcct
tacatggtttttggaacttttggagccgctgtgaatggaggagtcaatccagtgtactcg
ctgcttttcagccagatcctggcgacattctcaatgcctgaccctgctgcccagagaaga
gagattgacggaatctgtttgttcttcgtgttagtcggtgtgaccacctttttcacacaa
atgctgcagggttatgcgttttctaaatctggggagttgctgacacgtcgattgaggcgc
ctgggtttccacgccatgttaggccaagagatcggctggtttgatgaccacaggaatagc
ccgggtgctttgaccactagactggccacagatgcttcacaagtccaaggagccactggc
gcacagatcggaatgattttgaactctctgaccaacattggcgtagccatcattatctcc
ttctacttcagctggaagctcagcttggtcatcatgtgctttctgcctttcctcgcactt
tccggaggcttccaggccaagatgcttactggtttcgcaaagcaggacaaggaagcaatg
gaagcagctggtcagatatctggtgaggcgctgaacaatatccgcaccatcgctggtctc
ggtaaagagcgtagttttgtggaagtgtacgaagctcagcttgaggcaccataccaggct
gcactgaagaaggctaatgtatatggtgcatgctatggatttgcccagtgtgtcgtcttc
ctggcaaactcagcatcttatcgttttggtggatacttggtgcgccatgaggaccttcat
ttcagtttggtttttagggtcatctctgccatcgtaaccagtggaacagctttgggcaga
gcctcctcatacacacctgattatgccaaagcgaagatttctgcagctcgcttcttccag
ctgcttgaccgtcatcctaaaatcagtgtctacagtgacaaaggcgacaaatgggctgat
ttcagaggggatatcgagtttatagattgtaagttcacctacccgacccggccagatatc
caggttttgaacggccttactgtaagtgtgaagcctggtcagactcttgcttttgtgggc
agcagtggctgtggcaagagcactagcgtccagctgcttgagagattttacgacccagac
ttaggacgagtgctaatcgacggacatgattccactcgaatcaatgtcccgttcctgcgc
tctaagattgggatcgtttcccaggagccgattctgttcgactgcagcattgaggagaac
attcgctatggggataaccagagggggctcagcatggatgatgtcatctctgcagccaag
aaggcccagctccatgattttgtcatgtcacttcctgagaaatatgacactaatgtgggc
tcccaagggtcacagctctcacgtggtcaaaagcagcgcattgccatcgccagggcaatc
atacgagatccgaaaatcctcctgctggatgaggctacatcagccttagacacagagagt
gagaagacagtacaagaggctttggataaagcgcgagagggccgcacgtgcatcgtcatc
gcccatcgtctctccaccatccagaactctgacatcatagcagtgatgtcacgtgggttt
gtgatcgagtgcggtacgcacgatcagctcatgtccttaaatggagcttattacaagctg
gtcacgactggagcaccaatcagctag
DBGET
integrated database retrieval system