KEGG   Ictalurus punctatus (channel catfish): 108270741
Entry
108270741         CDS       T04658                                 
Symbol
abcb11b
Name
(RefSeq) bile salt export pump isoform X1
  KO
K05664  ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    108270741 (abcb11b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ipu02000]
    108270741 (abcb11b)
   04147 Exosome [BR:ipu04147]
    108270741 (abcb11b)
Transporters [BR:ipu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB11 subgroup
    108270741 (abcb11b)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108270741 (abcb11b)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N RsgA_GTPase AAA_22 ABC_ATPase AAA_29 Rad17 AAA_15 AAA_16 AAA_30 Zeta_toxin AAA_7
Other DBs
NCBI-GeneID: 108270741
NCBI-ProteinID: XP_017333104
Ensembl: ENSIPUG00000013273
UniProt: W5UKK6
LinkDB
Position
10:complement(5408432..5429339)
AA seq 1348 aa
MPGSVKLRSIKRFGQENDGYEFSAEERDAEYMTMATSKNHKKFKPGQKKEEAAIRVGFFQ
LFRFSTCHEILMMIFGSLCAIIHGAAQPLMLLVFGLLTDTFIDYDIELNELRDPAKHCLN
NTIQWRNLTAEENLELNMTRACGLLDIEYEMTNFAYYYVGIGCSVFVLGYVQISLWVTSA
ARQIKIIRKLYFSKIMRMEIGWFDCNSAGELNTRMSDDINKINDAIGDQVGIFIQRFTTF
VCGFLMGFVRGWKLTLVIISVSPLIGLGAGFMALFVAKLTGWELQAYAKAGAVADEVLSS
IRTVAAFGGEKKEVERYDRNLVSAQRWGIRKGLIMGFFTGYMWFIIFLCYALAFWYGSSL
VVDTQEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPEIDCLS
EAGYKLDKVKGDLEFHNVTFYYPSRPEVKILDKMNLQVKSGETTAFVGPSGAGKSTTVQL
IQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTIAENIRYGKPGVSDSD
IIKAAKDANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATS
ALDNESEAIVQEALDKVQIGRTTISIAHRLSTIKNADVIVGFEHGRAVERGKHDELMDRK
GVYFTLVTLQTQGDKALNQKAKQMEAEAAGEPEAESINLSRAGSYRTSLRASIRRGTKSR
LSNIIPESSVAIAGELGPQSYSESYVSQFSKKGVIPEDDEEEVEPAPVTRILKYNAPEWP
YMVFGTFGAAVNGGVNPVYSLLFSQILATFSMPDPAAQRREIDGICLFFVLVGVTTFFTQ
MLQGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGALTTRLATDASQVQGATG
AQIGMILNSLTNIGVAIIISFYFSWKLSLVIMCFLPFLALSGGFQAKMLTGFAKQDKEAM
EAAGQISGEALNNIRTIAGLGKERSFVEVYEAQLEAPYQAALKKANVYGACYGFAQCVVF
LANSASYRFGGYLVRHEDLHFSLVFRVISAIVTSGTALGRASSYTPDYAKAKISAARFFQ
LLDRHPKISVYSDKGDKWADFRGDIEFIDCKFTYPTRPDIQVLNGLTVSVKPGQTLAFVG
SSGCGKSTSVQLLERFYDPDLGRVLIDGHDSTRINVPFLRSKIGIVSQEPILFDCSIEEN
IRYGDNQRGLSMDDVISAAKKAQLHDFVMSLPEKYDTNVGSQGSQLSRGQKQRIAIARAI
IRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSRGF
VIECGTHDQLMSLNGAYYKLVTTGAPIS
NT seq 4047 nt   +upstreamnt  +downstreamnt
atgccaggatctgtaaagctgcgcagcattaaaaggtttggacaggagaacgatggctat
gagttttccgcagaagagcgagatgcagaatacatgacaatggcgacttcgaagaaccat
aaaaagttcaaaccaggccagaagaaggaagaagcagccatccgcgttgggttctttcaa
ctgttccgcttttccacatgccatgaaatcctgatgatgatttttgggagtttgtgcgct
ataatacacggcgctgcccagccactcatgctgctcgtgtttgggttgctgactgacaca
ttcattgactatgacattgagctgaacgagctgcgagatccagccaaacactgtctcaat
aacaccattcagtggcggaacctcacagctgaggaaaacttggagctcaatatgaccaga
gcctgcgggctattagatatagagtatgagatgactaactttgcttactactacgttggt
attgggtgttctgtcttcgtgctcggatacgtacaaatctctctatgggtgacaagcgct
gcccgacagatcaagatcatccggaagctctacttcagcaaaatcatgagaatggaaatc
ggctggttcgactgcaactctgcgggtgaacttaacacacgcatgtctgatgatatcaat
aagataaacgacgccattggggatcaggtgggaatctttattcagcgcttcaccaccttt
gtctgtggcttcctcatgggatttgtaaggggctggaagttgacactggtcatcatctct
gtgtctccactcattggactgggagctggttttatggctttgtttgtggcaaagctaact
ggttgggagctgcaggcctatgctaaagcaggtgctgtggcagacgaggtcctgtcctcc
atccgtaccgtggcagcattcggtggagagaagaaagaagtggaaaggtatgatcgtaac
cttgtctcagctcagcgctggggcattagaaaaggcctgatcatgggattcttcactggc
tacatgtggttcattatattcctttgttatgcgctggcattttggtatggctccagttta
gtggtggacacacaagaatacagccctggaaccctacttcaggtgttttttggggtgctt
attgccgcattgaacctgggacaagcatctccttgtctggaggcatttgctgcgggcaga
ggagctgctactatcatctttgagactattgaccgtgagccagagatcgactgcctgtct
gaagctggctacaagctggacaaggtgaaaggagatctggaatttcacaatgtgaccttc
tactatccttcgagaccagaagtgaagatcctggataagatgaatctacaggtgaagtct
ggggagactacagcttttgtggggccaagtggggcaggaaaaagcacaactgtacagctc
atccagcgcttttatgaccccaaagagggcatggtcactctggacggtcatgatattcgt
ggtctgaatatccagtggctccgctcactcatcggcattgtagagcaggagccagtttta
ttcgccactaccattgctgagaatattcgctacggaaaacctggtgtatctgacagcgac
atcatcaaagctgccaaagatgcaaacgcctacaactttataatggacttaccacagaaa
tttgacacgctggttggtgagggtggtggacagatgagtggtggccagaaacagcgaatt
gcaatcgctcgagccctggtgcgaaatcccagaatccttctgctggacatggcaacttct
gcacttgacaatgagagcgaagctattgtacaggaagctcttgacaaggtccaaattggt
cgtaccaccatttccattgcccaccgtttatcgacaataaagaatgctgatgtgattgtg
gggttcgagcatgggcgagctgtagagagaggcaaacatgatgagttgatggacagaaag
ggtgtttacttcactctagtcactctacagacccagggagacaaagctctcaaccagaaa
gccaaacagatggaagcggaggctgctggagagcctgaagcagagagcataaatctttct
cgggcaggaagttatcggacaagcctaagggcctccattcgtcgcgggactaaatcccgt
ttgtccaacatcattccagaatcctcagtagcaattgctggggaactcggtccacagtcc
tactctgaatcctatgtttcccagttcagtaaaaagggtgtcattcctgaagatgatgaa
gaggaagtagaaccagctcctgtgactcgaattctgaagtacaacgccccagaatggcct
tacatggtttttggaacttttggagccgctgtgaatggaggagtcaatccagtgtactcg
ctgcttttcagccagatcctggcgacattctcaatgcctgaccctgctgcccagagaaga
gagattgacggaatctgtttgttcttcgtgttagtcggtgtgaccacctttttcacacaa
atgctgcagggttatgcgttttctaaatctggggagttgctgacacgtcgattgaggcgc
ctgggtttccacgccatgttaggccaagagatcggctggtttgatgaccacaggaatagc
ccgggtgctttgaccactagactggccacagatgcttcacaagtccaaggagccactggc
gcacagatcggaatgattttgaactctctgaccaacattggcgtagccatcattatctcc
ttctacttcagctggaagctcagcttggtcatcatgtgctttctgcctttcctcgcactt
tccggaggcttccaggccaagatgcttactggtttcgcaaagcaggacaaggaagcaatg
gaagcagctggtcagatatctggtgaggcgctgaacaatatccgcaccatcgctggtctc
ggtaaagagcgtagttttgtggaagtgtacgaagctcagcttgaggcaccataccaggct
gcactgaagaaggctaatgtatatggtgcatgctatggatttgcccagtgtgtcgtcttc
ctggcaaactcagcatcttatcgttttggtggatacttggtgcgccatgaggaccttcat
ttcagtttggtttttagggtcatctctgccatcgtaaccagtggaacagctttgggcaga
gcctcctcatacacacctgattatgccaaagcgaagatttctgcagctcgcttcttccag
ctgcttgaccgtcatcctaaaatcagtgtctacagtgacaaaggcgacaaatgggctgat
ttcagaggggatatcgagtttatagattgtaagttcacctacccgacccggccagatatc
caggttttgaacggccttactgtaagtgtgaagcctggtcagactcttgcttttgtgggc
agcagtggctgtggcaagagcactagcgtccagctgcttgagagattttacgacccagac
ttaggacgagtgctaatcgacggacatgattccactcgaatcaatgtcccgttcctgcgc
tctaagattgggatcgtttcccaggagccgattctgttcgactgcagcattgaggagaac
attcgctatggggataaccagagggggctcagcatggatgatgtcatctctgcagccaag
aaggcccagctccatgattttgtcatgtcacttcctgagaaatatgacactaatgtgggc
tcccaagggtcacagctctcacgtggtcaaaagcagcgcattgccatcgccagggcaatc
atacgagatccgaaaatcctcctgctggatgaggctacatcagccttagacacagagagt
gagaagacagtacaagaggctttggataaagcgcgagagggccgcacgtgcatcgtcatc
gcccatcgtctctccaccatccagaactctgacatcatagcagtgatgtcacgtgggttt
gtgatcgagtgcggtacgcacgatcagctcatgtccttaaatggagcttattacaagctg
gtcacgactggagcaccaatcagctag

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