Ictalurus punctatus (channel catfish): 108270782
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Entry
108270782 CDS
T04658
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270782 (ccdc50a)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108270782 (ccdc50a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
108270782
NCBI-ProteinID:
XP_017333183
UniProt:
A0A2D0RRQ2
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All DBs
Position
10:complement(3127502..3155601)
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AA seq
583 aa
AA seq
DB search
MEDISIDQKRLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNIHKSRLVQEDLRVAK
RLQEEEDQRAKAQSQKQHQDIERTDNEIAQEIQEQLVRQAEKQKQQEAKDEAIARKLQER
EMKEERKRQKQLEAKLEEQYYEDKGASRPPSDPYVEYSGSDLAVSGRERHRDVSRGRSPD
HWPQKFEQNRRLDSHDNQNRYPEDDPVEGDHYRVYERHKSEQNRGKNEGRARRQAPEHHL
SEVRTKYPEECLAGRNKYTEAEPRYNQDLALTMKERAHRDDPSDRDRTRRKDRDQEKGRE
RRRKGDKAQYRDKSQDKLNRDPSRDRLRHKEVDMGQNGHRHRSRDLDVDLEIDKRGRRER
ERDEERHWSRDRSKGQELDHPSSRTRCSEERVENADYSNRQRLHSNDEVFEEPRSRSHHK
GQTLGHRGRNVQEEYGVREAIHGLSQIDLRTQELRDLEVARRLQEEELLASKLDKRAAQV
AQDEEIARQFMEEEERGYKKSREKERQHRRAEGDPRPTEEEMARPRTRDEYDYQKARNPK
SSRPPPHIHNYVNVDSSYAYSDNYTPRPPSRPEAAYKGAYYRQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggatataagcatcgaccagaaaaggctccccggcgtcaaagaagtgtgtcgtgat
tttgcagtgctggaggatcactgtctggcccacaaccttcaagaacaagaaattgagagc
cacctggcctccaacatccacaagagtcgtctggtgcaggaggatctccgggtggccaag
cgtctccaagaagaagaggaccagcgggccaaagcccaaagccaaaaacagcaccaagac
attgaacgcactgacaacgaaatagctcaagagattcaggagcagctggtccggcaggct
gagaagcagaagcaacaggaggctaaggatgaggccattgctcgtaagctgcaggagcga
gagatgaaagaggaacggaagaggcagaaacagctggaggccaaactggaagagcagtac
tatgaagacaaaggagcctcccgacccccttcagacccttatgtggaatactcaggttct
gacttggcagtgtctggcagagaaaggcaccgagacgtaagtcgaggtcgatctccagat
cactggcctcaaaaatttgaacaaaatagacgactggacagtcatgacaatcaaaacagg
taccctgaagatgaccccgttgaaggtgatcactacagagtctacgagcgtcataaatct
gaacagaatcgagggaaaaatgaaggcagggcaagaaggcaagcacctgagcaccacctc
tcagaggtaaggactaaatatccagaggaatgcttggctggaagaaacaaatacacagaa
gcagaaccacgttacaaccaggacctggcgttgaccatgaaggagcgagcacatagagat
gacccatctgacagggacaggacaaggagaaaagatcgagatcaagagaaaggaagagaa
agaaggagaaaaggagataaggcacaatacagagacaaaagtcaagataagctgaatagg
gaccccagtagagacaggctcaggcacaaagaagtggatatgggacaaaatggccataga
cacagaagcagagatttagatgtggacttggaaatagacaaacgtggacgtagggagaga
gaaagggatgaggaaagacattggagtagggacagaagcaaaggccaagagttggatcat
ccgtcttcccgtacacgttgttcagaagaaagagtggagaatgcagactacagcaacagg
cagaggcttcacagcaatgatgaggtgtttgaggagcccagatctagaagtcaccataaa
gggcaaaccctggggcatagaggacgaaacgtacaggaggagtacggggtgagggaagca
atacatggtttgtctcagatagacctgcgaacccaggagctcagagacttggaggtggca
cgcaggctacaggaagaggagctcttggcgagtaaacttgacaaacgtgccgctcaagtt
gcacaagatgaggaaatagctcgacaattcatggaggaagaggaaagggggtacaagaag
tctagagagaaagagagacagcatagacgagccgagggagaccccaggcccacggaggag
gaaatggcccgaccacgaacacgagacgagtatgactaccaaaaagctcggaatcccaaa
tcatccagacctccaccacatatccataactatgtgaatgttgactccagttatgcttat
tcagacaactacacccctcgcccgccttccagacccgaggctgcttataaaggtgcctac
tatagacagtga
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