Ictalurus punctatus (channel catfish): 108270789
Help
Entry
108270789 CDS
T04658
Name
(RefSeq) keratin, type I cytoskeletal 13
KO
K07604
type I keratin, acidic
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108270789
04147 Exosome [BR:
ipu04147
]
108270789
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108270789
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108270789
Exosomal proteins of other body fluids (saliva and urine)
108270789
Exosomal proteins of colorectal cancer cells
108270789
Exosomal proteins of melanoma cells
108270789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ADIP
PUMA_CC
DUF724
EzrA
CENP-F_leu_zip
Synaptonemal_3
DUF2335
Motif
Other DBs
NCBI-GeneID:
108270789
NCBI-ProteinID:
XP_017333196
Ensembl:
ENSIPUG00000012554
UniProt:
A0A2D0RSQ5
LinkDB
All DBs
Position
10:complement(5718800..5725237)
Genome browser
AA seq
435 aa
AA seq
DB search
MAVTLRRSASYSTGSIARSNFQTSGWGMGLNGMASSSQSIRGHYGPSFDFSSSFSPSHEF
SVFGSEKLAMQNLNSRLASYLEKVLSLETANLQLEQEINKFNESRTPTSRDLSKYYSIIE
DLQKQIISMAKQKQEVYTKLDNANITASEFKMKFENERDMCSSVEADLARLRMALGETEM
ETKDLQIQMSWLKEELSFLKKSHEEDLHVARTQQNGSVHVEVDSAPAVDLNKELEEIREQ
YEAVIIKNRNDIEQWFQNKVKNLNTEVLKSHTEITTSQTAFSDLKKTYETLEIEIKGIHT
QIQMLQNDLVQVGARYSEQLSQLQSHIDRIQTELQQITANIQQQAMEYQLLLDIKMRLEL
EIAEYRRLLEGEGQGYRIDTSTVTKKVTETVVKETQEAEEEKHHHQRRVKVIVEELVDGV
IVSSSVDEKVQDLPN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcacactccgtcgtagtgcgtcctacagtacaggcagcattgctaggtcaaat
ttccaaacttcaggttgggggatggggctgaatggcatggctagctcgagtcaatccatc
cgtggtcactacggtcctagtttcgatttttcatcctcattttccccctctcatgagttc
tcagtgtttggcagtgaaaagctggctatgcagaatcttaacagccgtctggcatcgtac
ctggagaaggttctctctttggaaactgccaatctacaacttgagcaggaaataaacaag
tttaatgaaagcagaacccccaccagcagggatctgagtaaatactacagcatcattgaa
gacctgcagaagcagattatttctatggccaaacaaaaacaagaggtttacacaaagctg
gacaatgctaatataacagcttctgaatttaagatgaagttcgagaatgagagggacatg
tgttcgtctgtagaagcagacctggctcgtctgcgcatggctcttggggagaccgagatg
gaaaccaaagacctacaaatccagatgtcttggctaaaagaagaactgagtttcctcaag
aagagccacgaggaggatctgcacgtggctcgcactcagcagaacggctccgtgcatgtg
gaagtagactctgctccagctgtggacctcaataaagagctggaggagatacgagagcag
tatgaggcagtcatcataaagaaccgtaacgacattgagcagtggttccagaacaaggta
aagaatttgaacactgaagtgcttaaaagccacactgagatcacaacctcccaaacagcc
ttcagtgacctgaagaaaacctacgagaccctggagatagaaatcaaagggattcacaca
cagattcaaatgctgcagaacgatctggttcaggtgggggcacgttacagtgagcagcta
tcacagctgcagtcgcacatagaccgaatacagacagagctccagcagatcactgccaac
atacaacaacaggctatggagtaccagctgctgttggacatcaagatgaggctggagctg
gagattgctgaatacaggaggcttctagagggagaaggacaagggtatcgtatcgacaca
tccacggtgaccaagaaggtgaccgaaacagttgtgaaagagacgcaagaggcggaagag
gaaaaacatcatcaccagagacgtgtgaaggttatcgttgaggagctggtggatggagtg
attgtgtcctcgagcgtcgatgagaaagtgcaggatttgcccaactga
DBGET
integrated database retrieval system