Ictalurus punctatus (channel catfish): 108270790
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Entry
108270790 CDS
T04658
Name
(RefSeq) keratin, type I cytoskeletal 50 kDa
KO
K07604
type I keratin, acidic
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108270790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108270790
04147 Exosome [BR:
ipu04147
]
108270790
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108270790
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108270790
Exosomal proteins of other body fluids (saliva and urine)
108270790
Exosomal proteins of colorectal cancer cells
108270790
Exosomal proteins of melanoma cells
108270790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Prominin
CCDC39
FKBP15
ADIP
ATG16
SKA1
AIF-1
NET2A_C
Lipase_GDSL_2
Plectin_PPL
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
108270790
NCBI-ProteinID:
XP_017333197
Ensembl:
ENSIPUG00000012578
UniProt:
A0A2D0RRS1
LinkDB
All DBs
Position
10:complement(5709895..5712442)
Genome browser
AA seq
467 aa
AA seq
DB search
MTSFSSQSFKSSGGSFSGGSFRGPGIGGSSRLSAIGGGGGGGGHRFMVSRAPSMHGGSGG
SGVRISTVSHSIRSGGGAAGLGFGSRAGFGFGAGGGAGGGAGGGAGGGGGFGFGGGFGGE
DVGVAANEKATMQNLNDRLASYLDKVRTLEKANADLELNIRQFLENKASPTARDYSAFED
TIRDLQDRIQDAARDNGSVYLSIDNAKLAADDFRTKYENELAMRQSVDADIAGLRRLLDQ
LTLTRSDLEMQIEGLKDELIFLKKNHEEELEAMRNAMSGSVNVEVDAAPAEDLNRVLAEI
REQYEAVAAKNKRELESWFQAKVDNLNKEVVTSSTTLEVSKSEVNDIRRTLQGLETELQS
QLSMKASLEGALADTEGRYSMKLAGLQDQVTGMEQQLGEIRDNIERQGQDYRILLDIKTR
LEMEIAEYRRLLDGEGDSVKTNFSKNIKVKTIVEEMVDGQVVSSTTS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttcagcagccagagttttaagtcctcgggtggctccttcagcggaggctct
tttcggggccctggtataggtggatcctctcggctttccgcaataggcggtggtggtggt
ggtggtggccaccgcttcatggtttcacgtgcccccagcatgcatggtggttctggagga
tctggtgtgcgcatttccactgtctcccactccatacgtagtggtggaggtgctgcaggc
ctaggttttggtagtagagcaggctttggctttggagccggtggaggagccggtggagga
gccggtggaggagctggtggaggaggcgggtttggctttggtgggggttttggtggtgaa
gatgtgggtgtggcagccaatgagaaggccaccatgcagaacctgaatgaccgcctggcg
tcctatctggacaaggtgcgcaccctggagaaggccaatgctgacttggaactgaatatc
agacagtttttggaaaacaaggcctcccctactgcccgagactactctgcttttgaagac
accatcagggacctgcaagataggatacaggatgctgccagagataacggaagcgtctac
ctgagcattgataatgctaaactggcagcagacgacttcagaaccaagtatgagaatgag
ttggccatgcgtcagtcagtggatgcagacattgctgggcttaggagactcttggatcag
ctgacactgacgaggtcagacctggagatgcagatcgaaggccttaaggatgagttgatc
ttcctcaagaaaaaccatgaggaggaactggaagcaatgcgtaacgccatgtccggtagt
gtgaacgtggaagtggatgctgcacctgcggaagacctgaaccgtgtcctggctgagatt
cgcgaacagtatgaagctgtagctgccaagaacaagcgtgaactagagagctggttccag
gccaaggtcgataatctgaacaaagaggtggtcaccagctcaacgactctagaagtgtcc
aagtcagaggtcaatgatatcagacgcaccttacagggcctggagacggagctacaatcc
caactcagcatgaaagcgtctctggaaggcgctctagcagatacagagggacgctactcc
atgaaactggctggactgcaagatcaggtaacaggaatggagcagcagctgggagagatc
agagataatatagagaggcaaggtcaggactacaggattctgctggacatcaagacccgg
ctggagatggagattgccgagtacaggaggctgctggatggagagggtgacagtgtcaag
acaaacttcagtaaaaatataaaggtgaagaccattgtggaagagatggttgatgggcaa
gtggtgtcctccacaactagttaa
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