KEGG   Ictalurus punctatus (channel catfish): 108270795
Entry
108270795         CDS       T04658                                 
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ipu03009]
    108270795
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    108270795
SSDB
Motif
Pfam: WD40_alt WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 WDR54 Ge1_WD40 KNTC1_N
Other DBs
NCBI-GeneID: 108270795
NCBI-ProteinID: XP_017333208
Ensembl: ENSIPUG00000013657
UniProt: A0A2D0RRS9
LinkDB
Position
10:complement(5138987..5210165)
AA seq 431 aa
MAAPVEVLVTADSAGQLWNCAIFDPHTGTNLLSYRGGNSSARSLTILNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGTVTCLTASPDGLYVLAGIAEAIYLWEVSTGNLLAILNRH
YQDLSCLRFTDDSSHFVSGGKDNLALVWNLASVIQLDSSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWEISSGEMLLSVVFDVSIMSVTLDPCEYFLFCGGSDGNIF
QVSLCSTAASRDKNFQTDGEGNQLFKGHRNLVTCLSVSMDGTLLLSGSHDETVRMWDVQS
KQCIRCINHKGQVTNAAIIPAPGNMFLPDSRPGIPLPRFSRHLNNSEQAEGTGTGGMSLR
LGANCQEPEETYLEKADRLHSLMCAVTDKSVFGDGENTKVRVSELEEEVRTLKKINKDLY
EFSTQLLTKPN
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcggcgcccgtggaggtcctggttactgctgattccgcagggcagctgtggaactgc
gctattttcgaccctcacaccggaacaaatctcttatcctaccgaggggggaattcatct
gctcgctctttaaccatcctcaacggagaatacatcctcggagctcaactcggcaagaac
ttcatcaacgtgtgggagatacaaagaaaggaccaacttcagcagaaaattgtgtgtcct
gggactgtaacctgccttacagcctcccctgatggcctctatgtgctggcgggcattgct
gaagcgatatatctatgggaggtttcaacaggaaacctgctggctattttgaatcgccac
taccaggacttgagctgcctgcgtttcactgacgacagcagccattttgtgtcgggagga
aaggacaatctggcacttgtatggaaccttgccagcgtcatacagttggactcatctcac
actccagagcctcggcacgtgttatcacgtcactctctccccatcacggacatccactgc
gggctgatgggacctcaggcaagagtagccactgcgtcgttagaccagaccgttaagctc
tgggaaatttcctctggagagatgcttttgtcggtcgtctttgacgtcagcatcatgtca
gtgacccttgacccctgtgagtacttcctgttctgtggaggaagtgatggaaatatcttt
caggtgtccctctgtagcacggctgcaagtcgggataagaacttccagacggatggcgaa
ggcaatcagctgttcaaaggccacaggaacctggtgacgtgcctgtccgtgtccatggac
ggtacgctgctgctgtcaggctcacatgacgagaccgtcaggatgtgggacgttcagagc
aagcagtgcatccgctgcatcaaccacaaaggtcaggtgacaaatgctgctataattcca
gcccccggcaacatgttcctgcctgatagtcgtcctggcatcccgttacctcgcttcagc
cgccatctgaacaattcagagcaagcagagggaaccggaacgggaggaatgtctctccgg
ctgggcgccaactgccaggagccggaggagacgtatctggagaaggcagaccgcctccat
tcgcttatgtgtgctgttacagacaagagtgtgttcggtgatggagagaacacaaaggta
cgcgtgtcggagttggaagaagaggtgcggaccctgaagaaaatcaacaaagatctgtac
gagttttccacacagctccttacgaagcctaattag

DBGET integrated database retrieval system