Ictalurus punctatus (channel catfish): 108270795
Help
Entry
108270795 CDS
T04658
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108270795
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108270795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
WDR54
Ge1_WD40
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
108270795
NCBI-ProteinID:
XP_017333208
Ensembl:
ENSIPUG00000013657
UniProt:
A0A2D0RRS9
LinkDB
All DBs
Position
10:complement(5138987..5210165)
Genome browser
AA seq
431 aa
AA seq
DB search
MAAPVEVLVTADSAGQLWNCAIFDPHTGTNLLSYRGGNSSARSLTILNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGTVTCLTASPDGLYVLAGIAEAIYLWEVSTGNLLAILNRH
YQDLSCLRFTDDSSHFVSGGKDNLALVWNLASVIQLDSSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWEISSGEMLLSVVFDVSIMSVTLDPCEYFLFCGGSDGNIF
QVSLCSTAASRDKNFQTDGEGNQLFKGHRNLVTCLSVSMDGTLLLSGSHDETVRMWDVQS
KQCIRCINHKGQVTNAAIIPAPGNMFLPDSRPGIPLPRFSRHLNNSEQAEGTGTGGMSLR
LGANCQEPEETYLEKADRLHSLMCAVTDKSVFGDGENTKVRVSELEEEVRTLKKINKDLY
EFSTQLLTKPN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtggaggtcctggttactgctgattccgcagggcagctgtggaactgc
gctattttcgaccctcacaccggaacaaatctcttatcctaccgaggggggaattcatct
gctcgctctttaaccatcctcaacggagaatacatcctcggagctcaactcggcaagaac
ttcatcaacgtgtgggagatacaaagaaaggaccaacttcagcagaaaattgtgtgtcct
gggactgtaacctgccttacagcctcccctgatggcctctatgtgctggcgggcattgct
gaagcgatatatctatgggaggtttcaacaggaaacctgctggctattttgaatcgccac
taccaggacttgagctgcctgcgtttcactgacgacagcagccattttgtgtcgggagga
aaggacaatctggcacttgtatggaaccttgccagcgtcatacagttggactcatctcac
actccagagcctcggcacgtgttatcacgtcactctctccccatcacggacatccactgc
gggctgatgggacctcaggcaagagtagccactgcgtcgttagaccagaccgttaagctc
tgggaaatttcctctggagagatgcttttgtcggtcgtctttgacgtcagcatcatgtca
gtgacccttgacccctgtgagtacttcctgttctgtggaggaagtgatggaaatatcttt
caggtgtccctctgtagcacggctgcaagtcgggataagaacttccagacggatggcgaa
ggcaatcagctgttcaaaggccacaggaacctggtgacgtgcctgtccgtgtccatggac
ggtacgctgctgctgtcaggctcacatgacgagaccgtcaggatgtgggacgttcagagc
aagcagtgcatccgctgcatcaaccacaaaggtcaggtgacaaatgctgctataattcca
gcccccggcaacatgttcctgcctgatagtcgtcctggcatcccgttacctcgcttcagc
cgccatctgaacaattcagagcaagcagagggaaccggaacgggaggaatgtctctccgg
ctgggcgccaactgccaggagccggaggagacgtatctggagaaggcagaccgcctccat
tcgcttatgtgtgctgttacagacaagagtgtgttcggtgatggagagaacacaaaggta
cgcgtgtcggagttggaagaagaggtgcggaccctgaagaaaatcaacaaagatctgtac
gagttttccacacagctccttacgaagcctaattag
DBGET
integrated database retrieval system