Ictalurus punctatus (channel catfish): 108270890
Help
Entry
108270890 CDS
T04658
Symbol
si:dkey-93h22.8
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108270890 (si:dkey-93h22.8)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
108270890 (si:dkey-93h22.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108270890
NCBI-ProteinID:
XP_017333371
Ensembl:
ENSIPUG00000021651
UniProt:
A0A2D0RT71
LinkDB
All DBs
Position
10:22974997..22988726
Genome browser
AA seq
1067 aa
AA seq
DB search
MAAPHCYRRRNLNTGFTEFVTPEAFPDAQVGSPKSHTLEFDDGALGCTSSTFHSSLEPSI
LSIFEDSSAEEAKIQIDEESEASLLSAFSEMLDSVIEDTLSPFDTLPDSKLFMGQRCQDS
RVRLHGLDREAAPRVTRSFTPSNSKAEGLHSDRQLRPRIHRRTQTATVQRSDGEEEDLSE
TRRRPVRTFRIESDPEMYEDEQQDGFVTVSLVDLVKHMHPYSLRVAMDKKESLRDVEELQ
EEDVFVDVVGDDDTQETSLGMPVASTLSNTSDLGSEQIVPHAQSPTVHSAVHNSKVCQKD
MLKMCSPNSGEQKEEDTAQRILANSGSSGRMKKKVRFAPDLASIHMYQVEDEAHECDVLD
ASTSADHTGDLQMADWDSQTSALSGNLNEVAKEPPSQNGNAKLKTLSLQEYRLLRQKKLP
KEERKTDYRTKWPSVPETPKELSPIPCIPGYNSSQVNVQNPSSNAETSTLGAVAKSRRNL
HLPVKSLSKQNALIRKPVQAVDPPNPVTVSLQPHAKILSPLSEEQKVMQQEIGKSQAIQT
NLNHPAAVQDSDIRKQPSSVAQVQPSMVSPEDSQSAKVKQTKCSLTMSGIVKTNIAAPSS
PVSVIPVHGSQESLPLVQIPVSNQSAEEKRQESTGEIGIEATDVTSLLEQFETQGFTPPA
TPPHQIWKPLTPTLKAKQHEATKPSPSKTIQIIEPKPLPPSKIQSKPQPTSSIPAPSLFL
AFIDHDYCATQDFKLGKKRALSAVYMHNRSKESRNHLSHMPMDNRTCCEGERLSGSVLLS
PDSSPCRLEARRMGEYMEPEAVRRSRYSCSLSPPARGRVRRRHSRGRYHHSDSSSMSSSR
SPSCSSSASSCSPPRKRYRSRHSASSSSSSSRSSSQSLSPAPIRGQRRCYRRSQSRSFSR
SRSRSHSPQPDWRQKWSRWKRQREYYHPSQGEDAFMAAKQKAIEERRVVYVGRIRGTMTE
DELRERFALFGKIEDCTVHFRSRGDNYGFVTYYNTDDAFAAIEKGTKLRQPDELPFDICF
GGRRQFCQSNYMDLDSNRDMDPASGRNKDDTLDFDTLLKQAQRGLKT
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcattgctacagacggaggaatttaaacaccggtttcaccgaattcgta
acaccagaagctttcccagacgctcaggttggatctccaaaaagccatactcttgaattt
gatgatggtgctttgggatgtacttcaagcacctttcatagcagcctggaaccttccatt
ttatcaatctttgaggattcatctgctgaagaggcaaagatccagatagatgaggaaagt
gaagcatcgctgctatctgctttctctgagatgctggacagcgtaatcgaagacaccctg
tccccttttgacacacttcctgactcaaaactttttatgggtcaaaggtgtcaggactcc
agagtgaggttgcatggtctggacagagaagcagctcctcgggtcactagatccttcaca
ccctcgaattcaaaagcagagggcctgcattcagacaggcagttgagaccaaggatccat
cgcaggacccaaactgccaccgtacagagaagtgatggtgaggaggaggacctcagtgag
accaggagacgccctgtgagaaccttccgcattgagtctgacccagaaatgtatgaggac
gagcaacaggacggattcgtaactgtatcattggtggacctggtcaaacacatgcatcca
tacagcctcagagtagccatggataaaaaagaaagtctcagggatgttgaggagcttcag
gaggaggatgtatttgtggatgttgtgggtgatgacgacacacaggagacatctttgggc
atgcctgtggccagcacactgagcaatacctctgatctgggttcagagcagatagttccc
catgcacaaagtcctacagtacacagtgctgttcataactccaaggtgtgtcagaaggac
atgctgaagatgtgctcgcccaactctggggaacaaaaggaggaggataccgctcagaga
atccttgctaattcgggtagttctgggagaatgaagaagaaggtgagatttgcccctgat
ttagcatctattcatatgtaccaggttgaagatgaagcacacgaatgtgatgtcctagat
gcctcaacttcagcagaccacacaggtgacctccaaatggcagattgggattcccaaacc
tcagctttaagtgggaacttgaacgaagtagcaaaggagccaccatctcaaaatggcaat
gcaaaactcaaaacgctcagccttcaggaataccgtcttctccgacagaagaagctccca
aaggaagagagaaaaacagactacagaaccaagtggccttcagtacccgagacccctaaa
gagctctctcccattccttgtataccaggttacaactcatctcaggttaacgttcaaaat
ccatcttctaacgcagagacctcaactctaggagcagtggccaagtctagaagaaacctt
cacctgcccgtgaaatccctctcaaaacaaaacgcattaatcagaaagcctgtgcaagct
gtcgacccaccaaaccctgtcactgtgtcccttcagccacatgcaaagatcttatcacct
ctatctgaggagcaaaaggttatgcaacaggaaattggcaagtcccaggcaatccagaca
aatctgaaccatcctgcagcagtgcaggactcagacattcggaaacagcccagttctgtt
gctcaagtacagccgtcgatggtttcacctgaggattcccaaagtgctaaagttaagcaa
acaaagtgttccctaacaatgtctggcattgttaaaaccaacattgctgctccatcctca
cctgtgtcagttataccagtgcatgggtctcaggaaagtctacctctagtgcagatacca
gtgagcaaccagtctgcagaggagaaacgacaagaatctactggggaaataggaatagag
gctactgatgtaaccagtcttctggagcaatttgagacacagggatttactcctcctgca
actcctccccatcagatctggaagcccttaacaccaactctgaaagcaaagcaacacgaa
gccactaaaccatctcccagcaaaaccatacaaatcattgagcctaagccactgcccccc
agtaagattcagtcaaagccccaacctacatcctccatccctgccccgagtctgtttcta
gcatttatagaccatgactactgcgccactcaggacttcaaactcggcaagaagagagca
ctttctgctgtttatatgcacaacagatctaaagaatcaaggaatcatttgagccatatg
cccatggataacaggacttgctgtgagggtgagcgtctttctggctctgttctgctgtcc
ccagacagctccccctgcagattggaggccagaagaatgggtgaatatatggaaccagaa
gcagttaggcgttcgcgctattcatgttccctgagtcctccagccagaggaagggtaagg
aggaggcattcccgtgggaggtatcatcattctgactccagttcaatgtcctcttcccgt
tctccttcctgctcttcatcggcttcatcatgttcaccacccagaaagaggtacagatca
cggcactcggcgagcagctcaagctcctcgtcccgctccagttcacagtcactctccccc
gctccgatccgaggacagcgacgctgctaccgtcgatcacaatccagatccttcagtcgc
tcgcgatcgcgctcccactctccgcaaccagactggaggcagaagtggagcagatggaag
aggcagagggaatactatcatccgagtcaaggggaagatgctttcatggcggccaagcag
aaagctattgaagaacgcagggtggtgtatgtgggaagaatacgtggcacgatgaccgag
gatgagctcagggagcgctttgcactgtttgggaagattgaggattgcaccgtccacttc
aggagtcgtggcgacaactatggatttgttacatattacaacacagacgatgcatttgct
gccattgagaaggggacaaagttgaggcagccggatgagctcccattcgatatttgcttc
ggtgggagacgacagttctgccagtcaaactacatggatttagattctaaccgtgacatg
gacccagcctcaggaaggaacaaggatgacacacttgactttgacactctgctgaagcaa
gcccagcgagggctaaagacgtag
DBGET
integrated database retrieval system
