Ictalurus punctatus (channel catfish): 108270993
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Entry
108270993 CDS
T04658
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108270993 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108270993 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108270993 (kars1)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108270993 (kars1)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108270993 (kars1)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108270993 (kars1)
Prokaryotic type
Other AARSs
108270993 (kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108270993
NCBI-ProteinID:
XP_017333596
Ensembl:
ENSIPUG00000009862
UniProt:
A0A2D0RTU4
LinkDB
All DBs
Position
10:27365171..27376995
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AA seq
606 aa
AA seq
DB search
MLTLVRAARQPVCRAVGLRVQKFVPHVLQTLPSLIEGCRWRGDKSELKRRAKAEKKAAEK
EAKTKDQAQQNKEANDKQHVDGLDEETLDPNQYFKIRTQAVQALKGTAEDPYPHKFHVDL
SLTEFIEKYNHLQPGEQLSDVVLNVSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNY
KSEEDFVHINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHLHFGLKDK
ETRFRQRYLDLILNDSVRQKFVTRAKIITYLRNFLDQLGFLEIETPMMNLIPGGAVARPF
ITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMA
YADYHDLMEITEKLLSGMVKHVTGGYKLTYHPDGPEGQGYEIDFTPPFKRISMTHDLEKE
MGVKFPAADTYDSDETRKFFDDLCAQKGVDCPPPRTTARLLDKLVGDFLEVKCINPTFIC
DHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNSYTELNDPIRQRELFEQQAKAKAEGD
DEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDENKPAAP
AEGTSV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgctggtcagagcagccaggcagcccgtgtgccgggccgtcgggttacgggtg
cagaagtttgtgccccacgttctgcaaacgctgccttcgcttattgaaggatgtcgctgg
agaggtgacaaaagtgagctgaagaggcgtgcgaaggcggagaagaaggccgcggagaag
gaggccaagaccaaggaccaagcgcagcagaacaaggaggcgaatgacaagcagcatgtg
gacggactggacgaggagactctggaccccaaccaatacttcaagatccgcacgcaggcc
gtccaggctctgaagggaaccgctgaagacccctatccccacaagtttcacgtggacttg
tctctcaccgagttcattgagaaatataatcacctacagcccggggagcagctgtccgat
gtcgtccttaacgtttctggtcgtgtccacgccaagagagcctccggggccaaactgctc
ttctatgacctccgaggagagggggttaagctgcaggttatggcgaactccaggaattac
aaatcggaggaagacttcgtgcacatcaacaataaattgcgccgtggtgacatcatcggg
gtacgcggtaatcctgggaagacgaagaaaggcgagctgagcatcatccctgtagagatg
accctgctgtctccatgtctgcacatgcttcctcacctgcatttcggcctgaaggacaag
gaaacccgtttccgtcagcggtatttggacttgatcctgaacgactctgtgaggcagaag
tttgtgacacgcgccaagatcatcacgtacctgcgcaacttcctggaccagcttggtttc
cttgagatcgagaccccgatgatgaacctgattcctggaggcgcagtggctcggcctttc
atcacttaccacaacgagctggatatgaacctgtacatgaggatcgcgcccgagctttac
cacaagatgctggtggtcggaggtatcgaccgcgtctatgaaatcggtcgtcagtttaga
aacgaaggcatcgacctcacgcacaaccccgagttcactacgtgcgagttttatatggcc
tacgctgactaccacgacctgatggagatcactgagaagcttctctcaggaatggtgaag
cacgtcacaggaggttacaagttgacctatcaccctgatggaccggaaggacaaggctat
gaaatcgacttcactcctccttttaagagaatcagcatgacccatgatctggaaaaggag
atgggagtgaaattcccagccgctgacacttacgattctgacgaaacccgcaaattcttc
gacgacctgtgtgctcagaagggagtggactgtccgcctccaagaacaacagctcggctc
ctggataagttggtgggagatttcctcgaggtgaaatgcatcaaccctacgtttatttgt
gaccaccctcagatcatgagcccactggcaaaatggcacagatcccagaaagggctgacc
gagcgcttcgagctcttcgtcatgaagaaagagatctgtaactcctacaccgagctgaac
gacccgatccggcagcgcgagctctttgagcagcaggctaaggccaaggcagaaggtgac
gacgaggccatgtttatagatgagacgttctgcacggcattagaatatggccttccacct
actgcaggctggggaatgggcatcgaccgtctcaccatgttcctcactgactccaacaac
atcaaggaggttcttctcttccccgccatgaagcctgatgagaataaacccgccgctcca
gcagagggcacttctgtttaa
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