Ictalurus punctatus (channel catfish): 108271014
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Entry
108271014 CDS
T04658
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271014
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108271014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
Motif
Other DBs
NCBI-GeneID:
108271014
NCBI-ProteinID:
XP_017333654
Ensembl:
ENSIPUG00000021347
UniProt:
A0A2D0RT25
LinkDB
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Position
10:complement(23258140..23287446)
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AA seq
1266 aa
AA seq
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MESHEEKPIIYTMENKPIVTCAGDQNLLTALYSLLAQQLPREPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTETYKSSVKEDMQRWQSVLKLHGSAD
WLIVVVESDGKKKNKTNILPRTSIMDKIRNDFCNKQSDRCVALSDPLKESSRSQESWNSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQYEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCQPVRNWNGLLLRRPIDMEKRELIQRSEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANFSHTVGLWTYATEKLKCLGCLCGLVSENGPNSEELNCTVDL
LAGLGTERPETANSLQSPYKKLKEALSSVEAFEKHYLELSHAALEMYRAIGRLRSARLVG
KSLAEFYMRKGDAQTAKTFLQDSLKSYTIEGWSLPLTHTRKQIAECQKQLQQTEDYLQTS
ALLASDTNLTEEERKHFCQEILTFANKAPEGKDQQVVLSMTAFAQLRELQFQPASATVHV
GASLQLELRLCSLMPIPVHLEKLAASVHFTGEQPGMRCGPAGTQRRSGLSPDGTISFPAV
SPSGGVLPGTSMPALELYEIQDRSPSDNMLNSTSVVCKNAHMLLRGNDGPSPLDVHSSVG
STFTMEDGMQVLKTNNMTLLPGSNSIIFTALSTKPGTYTLRQLCATVGRVQFVLPHIYPI
VKYEVYSQEPQLTIEPLTESLLAGLPQRVKFTILTGHYEVKKGDALQLSNTDSMPILHSS
SCSARILSGTGELVREADLSIQASEKVTSISLPLTPPYHTLEFQLEVLCHIPLSPARVES
ERLTNGEIRHRPKSRTRFNSGMAFIDQKVSIDCPWSIYSILISLTFYTPFRAKHALLSAG
KRKYIQVCLENVSNTNFQLANQTLSEHQLTPLLELLSLNAKTHQVVYSKQSVYSLWEVKW
TTEPLPCLQCVFSASFSPADAPITALKPYSYEFQLERVSTLYSVKADIQPAVGEQHCRAG
TLCRLEVSVTRLTEPSDTEGEDEELTENEGLRTTKLMYEVVDNSSNWAVCGKSSGLVSMP
VAAMATHKVQMEVMPLFAGKLPFPSIRVFKYLPHCAQPTSQPDTDSCLENDNLSLLDKGL
EEQGDTASLRSRGSIHSVGSNEQQQRALPMPRLEPFSPGQVFNSSQTQQVLVLPSTDDHV
LEVNVT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccatgaggaaaagcccatcatttacacgatggagaataaacccatagtgaca
tgtgctggggaccaaaacctcttaactgctctttatagcctgctggcacagcagcttccc
cgggagcctatggagtggagaaggtcttatggtcgagcaccaaagatgatccacctagaa
gccaactttgtccagtttaaagaggagctgcttcctaaagagggaaacaaggctctcctc
acgttccctttcctgcacatttactggactgactgctgtgatacggagacgtacaagtcc
tcagtgaaggaggacatgcagcggtggcagagcgtgctgaagctacacggctcagctgac
tggctcatcgtggtcgtggaaagcgatggcaaaaagaagaacaagaccaacatcctgcct
cgtacctccatcatggacaagatccgcaacgacttctgcaacaagcaaagcgacaggtgt
gtcgcactctcggatcccttgaaggagtcgtctcgctctcaggagtcgtggaactcgttc
ctgactaagctgcgcactctgcttctcatgtccttcactaagaacctgggccgcttcgag
gacgacatgcgaacgttgcgggagaaacgcaccgagcccggctggagcttctgcgactat
ttcatggtccaggaagagctggcatttgtgtttgagatgctacagcagtatgaagatgcg
ctggtccagtatgatgagttggatgccctcttcacccagtatgtgcttaactttggcgct
ggagatggtgccaactggctgggctcattttgccagccggtacggaattggaatgggctt
ctcctgcgcagaccaatagatatggagaagagggagctaatccagcgcagtgaggctagc
ctgctagacctgcgcagctacctgttctctcgccagtgcacgctgcttatcttcctgcag
aggccctgggaggtcacacagagagctctggagctgcttcacaactgtgtccaggagctc
cgtctgcttgaggtgtcggttgtccagggggctctggactgctgggtcttcctcagctgt
ctggaggtgctgcacagaatcgagggctgttgtgatcgcgcccagctggaagccaacttc
tcccacactgtgggcctctggacttatgctactgagaagctgaagtgtctaggctgtttg
tgcggtttggtgtcggagaacggacccaactcggaagaactgaactgcactgtcgacctg
ctcgcaggcctcggcacagagagaccagagacagccaacagtcttcagagcccgtataaa
aaacttaaagaagccttatcatcagtggaagcttttgaaaaacactatctggagttgtcc
cacgctgctctggagatgtacagagccattgggaggctgcggtcagctcgactggtggga
aagagcctggctgagttctacatgaggaaaggtgatgcacagacagcaaagaccttcctg
caggactctttgaagtcatacacaatagaaggctggagcctgccgctcacacacacgcgt
aagcaaatagcagagtgtcagaaacagctgcagcagacggaggactacttgcagacaagc
gctctgctggccagcgacactaacctgacagaggaggagagaaagcacttctgtcaggag
atcctcacctttgcgaacaaggctccagagggcaaagaccagcaagtggtcctgagcatg
actgcgtttgctcagctgcgagagctgcagtttcagccagcatccgccacagtgcacgtt
ggtgcatccctgcagttggagctgcgtctgtgcagcctgatgcccattcctgtgcatctg
gagaagctggcagccagcgtccattttacaggggagcaaccaggcatgcgttgtggccca
gcaggcacccagcggcgctccggactcagtccagacggcaccatctcctttcccgctgtg
agtccgtctggcggggtgttgccaggaacaagcatgcccgctctggaactttacgaaata
caggaccgcagtccctccgacaacatgctcaactccactagcgttgtctgcaagaacgca
cacatgctgctgcgtggcaacgatggcccctcccccttggacgtgcatagcagtgtaggc
tccacctttactatggaggatggaatgcaggttctgaagaccaacaatatgacgttgttg
ccaggcagcaacagcatcatcttcacggcgctgagtacaaaaccaggcacctacactctg
cgacagttgtgtgctacagtgggccgtgtgcagtttgtgctgccacacatttaccccata
gtgaaatatgaggtatactcccaggagcctcagctgaccatcgagcccctcacagagagc
ctgctggctgggcttcctcagagggtgaagtttaccattctaacaggccactatgaagtt
aagaagggtgacgctctgcagctgagtaacaccgactccatgcctatcctgcactcctcg
tcctgctctgcccgtattctctctggcactggagagctggtgagagaggctgatctgtcc
atccaggcttcagagaaggtgacaagcatctctctgcctctaactccaccctaccacaca
ctggagttccagctagaggtgctgtgccatatcccattatcaccagcacgtgtcgaaagt
gagcgcctcaccaacggcgagatccgtcaccggccgaagagccgcacacgcttcaacagc
ggcatggctttcatcgaccagaaggtgtccatagactgtccctggtctatatattccatc
ctcatttccctcaccttctatacccccttcagagccaaacatgcgctactgtcagcaggg
aaaaggaagtacatccaggtgtgccttgaaaatgtatcaaacacaaacttccagcttgcc
aaccagacgctgtcggagcaccagctcacacctttactggagctactctctctcaatgct
aaaacacaccaggtggtgtacagtaagcagagcgtgtacagtctgtgggaggtgaagtgg
accacagagccactgccatgtctgcagtgcgtgttttctgccagcttttctcctgccgac
gctccgatcacggcgctcaaaccctacagctacgaattccagttggagagagtctcaacc
ctatacagtgtgaaggcagacatccagcctgcggtcggagagcagcactgtcgcgccggc
accctctgtcggctagaagtatcggtcacgcgtctgacagagccgagcgacacggaggga
gaggacgaggagttaacggagaatgaaggccttcgcacgaccaagctcatgtatgaggtg
gtggataacagcagtaactgggctgtgtgtgggaagagttcagggttagtatccatgcct
gtggctgccatggcaacgcacaaagtacagatggaggtcatgcctctgtttgcaggcaag
ctgcccttccccagcatcagagtgttcaagtacctgccccactgcgcacaaccaacaagc
cagcctgacacagactcatgcctagagaacgacaacctctctcttctggataagggcctg
gaggagcagggagacacggccagtctgcgcagccggggaagcattcactctgtgggcagt
aacgagcagcagcagagggctcttcccatgccacgactcgagcccttcagcccgggccaa
gtgttcaactccagccagacacaacaggtcctggtgctccccagcacagacgaccatgtg
ctcgaggtcaacgtcacatga
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