Ictalurus punctatus (channel catfish): 108271035
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Entry
108271035 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1 isoform X1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108271035
03036 Chromosome and associated proteins [BR:
ipu03036
]
108271035
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108271035
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108271035
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108271035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-RING_10
zf-C3HC4
PHD_2
zf-RING_2
zf-RING_UBOX
Prok-RING_4
zf-RING_5
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
108271035
NCBI-ProteinID:
XP_017333714
Ensembl:
ENSIPUG00000024984
UniProt:
A0A2D0RT93
LinkDB
All DBs
Position
10:15066134..15079070
Genome browser
AA seq
785 aa
AA seq
DB search
MWAAAMWIQVRTMDGKQTHRVDSLSKLTKVDELRLRILELFNVEPERQRLFYRGKQMEDG
HTIFDYNVGLNDIVQLLVRQALPAVSLPKDKEAELSDSDSGCGSGQSESDKSSTHGECEG
QSAGTSAQSDLVDPGFGFYKINEFVDARDLNMGAWFEAQIVNVTKTPKPIEGEGMETDGE
DEIRYHIKYEDYPENGVVQLQGKDVRPRARTVYQWHQLEEGMVVMVNYNPDEPKERGYWY
DAQIQRKRETRTQREIFGKILLGDAGDSLNDCRILFVSEIYKIEEAGSSEGSTAASDSPL
KRSNGPECKHCKDDPKKTCRWCNCRVCGVKQDPDKQLLCDECDMAFHTYCLNPPLTTIPT
DEDWYCPECRTDASEVVLAGEKLKESKKKAKMASASSSSQRDWGKGMACVGRTKQCTIVP
SNHYGPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDDGN
EFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNCNAPVNEKDGAEAKDWKAGKPVR
VVRSSKGRKHSKYCPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLKRNDDESAPWTRDG
KERIKKLGLTMQYPEGYLEAVAAKEKEKENKNEDEVADTPAKGKRKRKSQAVEDEEKTSP
SKSTPKKVKVEAYKLTKEQKALIKEDELNKKLWDEAMESLSLGPRFINKVEEVFLCICCQ
EVVYQPITTECQHNVCRECLQRSFKAEVYSCPACRHDLGKNYQMTVNKALQAILTQLFPG
YSSGR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgctgcaatgtggatccaggtgcgcactatggacggtaagcagacccaccgg
gtcgactccctgtccaaactcactaaggtggacgagctgaggctgcgaatcctggagctc
ttcaacgttgagcctgaaagacaaaggctcttctacagaggcaaacagatggaggatggc
cacactattttcgattacaatgtgggcctcaatgacattgttcagctcctcgtgagacaa
gcgcttcctgcagtctctttgcccaaagacaaggaggccgagctgtcagactctgactcg
ggctgcggttcgggtcagagtgagtcggataagagctccactcacggtgagtgtgagggt
cagagtgctggaacctcggcccagagtgacctcgtcgacccaggttttggcttctataag
ataaatgagttcgtggacgccagagacctgaatatgggtgcttggtttgaggctcagatc
gtaaacgtgacaaagactcccaaacccatagaaggtgaaggcatggaaacggatggtgag
gacgagatccgctaccacatcaaatacgaagattacccggagaacggggtggtgcagctc
caggggaaggatgtgcgcccacgtgcccgcaccgtctaccagtggcaccagctggaggag
ggcatggtggtcatggtgaactacaaccccgacgagcccaaagagcgtggctactggtac
gatgctcagatccagaggaagagggagacgcgcacccagcgagagatttttggcaaaata
cttctcggggatgctggagactctctgaatgactgccggatcttgtttgtgagcgaaatc
tacaaaatcgaagaagctggaagctctgagggatccacagccgcttctgacagccctctg
aagaggtccaatgggccagagtgtaaacactgtaaggacgaccccaagaaaacctgccgc
tggtgtaattgccgtgtgtgtggggtgaagcaggaccctgacaagcagctgctgtgtgat
gagtgtgatatggccttccacacatactgccttaacccgcctctcaccaccattccgact
gatgaggactggtactgccccgaatgtcggactgatgcaagcgaggttgtcctggccgga
gagaagctgaaggaaagcaagaagaaagcgaagatggcatctgccagctcgtccagccag
agagactggggcaaaggtatggcgtgtgtgggccgcaccaaacagtgtaccatcgttccc
tccaaccattatgggcctgtgccaggagtccctgtgggtaccctctggaagtttagagtg
caggtgagtgagtccggagtccacaggcctcatgttgcagggatccatggccgaagcaat
gacggtgcttattctctagtgctggctggaggctatgaggatgacgtggatgatggtaac
gagtttacatatacaggttctggtggtcgagatctctctggtaacaagcgaactgctgaa
caatcctgtgaccagaaactcaccaatatgaacagggccctggctctgaactgcaatgcg
ccagtgaatgagaaggacggtgctgaggcaaaggactggaaggcggggaagcctgtgagg
gtggtgcgcagttctaaaggtcgcaaacacagcaaatactgcccagaagatgggaacaga
tatgacggcatttacaaggtggtgaagtactggccagagaagggcaagtcaggtttcctg
gtatggagatacctgctcaaaaggaatgatgatgaatcggcaccgtggacccgagatggc
aaagaacgcattaaaaagctgggtcttaccatgcagtatcctgaaggttatctggaagca
gtggctgcaaaggagaaggaaaaggagaataagaatgaggacgaggtggctgacacacct
gccaagggcaagaggaagcggaaatctcaggcagttgaggatgaggagaaaacttcacca
tctaagagcacacccaagaaggtcaaagtggaggcctacaagctgaccaaggagcaaaag
gccctgatcaaggaagacgagcttaacaagaaactttgggatgaggccatggagtcttta
agcttaggacctagatttataaacaaggtggaagaagttttcctgtgtatctgctgccaa
gaagttgtttaccagcccatcaccacagagtgccaacacaatgtctgcagggaatgtctc
cagcggtccttcaaagcagaggtatacagctgccccgcctgtcgtcacgatctaggcaag
aactaccagatgacggtgaacaaagctctacaagccatcctgacccagctgttccctggc
tacagcagcggccgatga
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