Ictalurus punctatus (channel catfish): 108271067
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Entry
108271067 CDS
T04658
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271067
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108271067
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
108271067
NCBI-ProteinID:
XP_017333789
Ensembl:
ENSIPUG00000023210
UniProt:
A0A2D0RTG4
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All DBs
Position
10:complement(20432117..20563963)
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AA seq
738 aa
AA seq
DB search
MATPAAVNPSEMGTDLPGPVTMAGSVVGSGQVRMGGNMPGRGGKRRSTGMDFDDEDGEGP
SKFSRYDDDQMPADKERYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTI
LRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSD
SVTPVLNHPQSEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQS
SMRMCMGSRRSFICRMRCGSAPLDHISLNRLSSMRKRYRNGLGPSKEGEAQYSVVHCTGY
IKAWPPAGMTIPEDDSEAGQTSKYCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDG
IITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRM
KNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQADLEVHQRDGLTAYDLSQV
PVGSVPGSVHEAGKSIDKTETLFSQERDPRFSDMYTGISGSDKKMMVPSSTAGGQQLYSQ
GSPFQPGHSGKNFSSSVIHVPGVNDIQSSAGSAGQNLAQISRQINSSQVQWSGSRPPFSG
QQQLPAQSSKAQSSPFAIGSSHSYQADPSSYSPLSSPATSSPSGNAYSSLTNRSTAFDVA
GEGSQSGAQFQGRPSEVWSQWQSQHHSQQSGEQHTHTQPSQSEVFQDMLPMTGDPTQGTA
NYNIEDFADLGMFPPFSE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacccgccgctgttaatccatccgagatgggcacagatctgcctggcccggta
accatggcaggttctgttgtgggttcagggcaggtgagaatggggggcaacatgccagga
cgagggggcaagaggagatcaacggggatggactttgatgatgaagatggagaagggccg
agcaaattttcaaggtatgatgatgatcaaatgccagctgataaagaacgttatgccaga
gagaaccacagtgagattgagcgacgccggcgtaataaaatgacgcagtacatcactgag
ctgtcggacatggtgcccacttgcagtgcgttggccaggaaacccgacaagctcaccatc
ctgcgtatggccgtgtcacacatgaagtccatgagaggaactggcaacacgtccactgat
ggagcctacaaaccctccttcctcaccgagcaggagctgaagcacttgatcctggaggca
gctgatggcttcctgtttgtggtggcagctgagacagggcgtgtgatctacgtgtcggac
tcggtgacccccgttctgaaccaccctcagtccgagtggttcggcagcactctgtacgag
caggtccacccggatgacgtggacaaactccgcgagcagctcagcacctccgagaactcc
atgactggccggatcctggacctgaagacggggacagtgaagaaggaaggacagcagtcc
tcaatgaggatgtgtatgggctccagacgctcctttatctgcagaatgaggtgtggcagc
gcgcctctggatcacatctctctcaaccgtctgtcgagcatgaggaagagatacaggaat
ggactcgggccatcaaaggaaggcgaggctcagtattcagtggtgcactgcactggctac
atcaaggcttggccccctgcgggcatgacaatccctgaagatgactcagaagcaggccag
accagtaaatactgcctggtcgcaattggaagacttcaggtgaccagttctccagtctcc
atggacatgaacgggctgtctgttccgacagagtttctttctcgtcacaactcggacggc
atcatcacctttgtggatccccgctgcattaacgtgattggctaccagccgcaggacttg
cttggtaaagacattctggagttttgtcatcctgaggatcaaagccacctaagggagagc
tttcaacaggtcgtgaagctgaaaggtcaggtcttatcagtcatgtaccgtttccggatg
aagaatcgcgagtggatgctgatcagaacaagcagcttcaccttccagaatccatactca
gacgagattgagtacatcatctgcactaacacaaatgtcaagcaactacagcaacagcag
caggcagacctggaggttcatcagagagatggcctgacagcatatgatctctcacaggtg
ccagtgggcagcgtgccaggcagcgtacacgaagcaggaaagagcattgacaaaacggag
acgctgttctctcaggagagagatccacgtttcagtgacatgtacacaggcatctctggc
tcggataagaagatgatggtgccgtcatccactgcaggaggacaacagctatattcccag
ggcagtcctttccagccaggacactcgggcaagaacttcagctcctcagtgatccacgtt
ccgggagtaaatgacatccaatcatctgccggttcagcgggtcagaatttggctcaaatt
tcccgtcagattaactccagtcaggtgcagtggtcaggcagcaggccaccattctccggc
cagcagcagctcccagctcagtccagtaaagctcagtcttctccgttcgccatcggctca
agccacagctaccaggccgacccgtcctcttacagcccgctgtccagcccagcgacgtcc
tcccccagcggcaatgcctactccagtctgaccaatcgcagcactgcattcgatgttgca
ggtgagggcagtcagagcggcgctcagttccagggacggccgtctgaggtttggtctcag
tggcagagtcagcatcacagccagcagagcggagagcaacacacacacactcagcccagc
cagtctgaggtgttccaggacatgttgcctatgacaggagaccccacgcaaggaacagcc
aactacaacattgaagatttcgccgatttgggcatgttccctccattttctgagtaa
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integrated database retrieval system
