Ictalurus punctatus (channel catfish): 108271082
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Entry
108271082 CDS
T04658
Name
(RefSeq) DENN domain-containing protein 1B
KO
K20160
DENN domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271082
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108271082
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
FRB_dom
Motif
Other DBs
NCBI-GeneID:
108271082
NCBI-ProteinID:
XP_053539031
UniProt:
A0A9F7RBF2
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Position
10:complement(3687015..3786279)
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AA seq
754 aa
AA seq
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MDSRIRENPERLFDLVLQVACPSSENEDPTVLWKFPQDFGDQEVLQTVPKFCFPFDVERV
SQNQVGQNFTFVLTDIDSKQRFGFCRLTSGCKVCICLLSYLPWFENYYKLLNAFADYLAK
HQEDELSEVLEKLHRLAVPKPNTAVTLSLHLHFVAPDITGLPTIPENRNLTEYFVAVDVN
NMLHLYASMLHERRIIITSSKLSTLTACVHGSASMLYPMHWQHIYIPVLPPHLLDYCCAP
MPYLIGVHLSLLERVKSRSLEDVIILNVDTNTLESPADDLHSLPSDVVSSLKSKLKKQST
ATGSGVARAFLRAQAALFGSYRDALRYKPGEEITFCEESFVAHRSSTMKSFLEMAVNLQL
FKQFIDGRLAKLNEGRGFTDVFEEEITEGGFCGSNSRSYQQWMHTVKKGVNKASPVVKSA
YKIAKVHAKKGLRGVKDRMRLKDTEEEGVLYCTGSPTSTKSLSPRRLQKRRYQNQNSHKY
ADFPDYPIDMEDELDTASKISSEDSGETPFYMEDSDDSCELDHEAGQTGQMNLLEEILDS
LSTTTLDHGSRLSSAKSLDFFRSMDEIDCSTTNMSLGKTSPVQAGEVGTATSGDQSGWNM
GQDDSAINGKHLPPSPRRQCSTRSLPATSTKPCETLADTRNSLTEPPTQPLAFEIGESAS
PPVQLELPSDLKLSPETEGCSGLRRKVLSRETLRHYQELSQHGGSNRQSSLLIPWEKENK
GSREEMVQEEAVVQEKGLLEEIECRLNAALNSNL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagaatacgtgagaatccagaaaggctgtttgatttggtgctacaggtggca
tgtccgtcgtctgaaaacgaagatccgacagtgctgtggaagttcccccaggactttgga
gaccaggaggtcctgcagacggtgcccaagttctgtttcccgtttgatgtagaaagagtg
tcccagaatcaggtgggtcagaacttcacgtttgtgctgactgatatcgacagcaagcag
aggttcggattctgccgtctcacctccggctgcaaggtgtgcatctgcctgctcagctat
cttccctggtttgagaattactacaagctgctaaacgcctttgcagactacttagcaaaa
caccaggaagacgaactgagtgaagtgttggagaagctgcacaggctggccgtgcccaaa
ccgaacacagccgtaactctgagcttgcacttgcactttgttgccccagatattactgga
cttcctaccatacctgaaaacaggaatctaacggagtactttgtggcagtggacgtgaat
aacatgctgcacctgtacgccagcatgctgcatgagcggcgcatcatcattacctcgagt
aagcttagcactttaaccgcatgtgtgcatggctcagcttccatgctctaccccatgcac
tggcaacacatctacatccctgttcttcccccacacctgctggactactgctgtgcaccc
atgccatatctgattggagttcatctgagcctgttagagagagtgaagagcagatccctg
gaagacgtgatcattctaaacgtggacacgaacacgctggagagtcctgccgacgacctg
cacagcctgcccagcgatgtggtctcgagtctgaagagtaagctgaagaagcagtcgact
gccacgggcagcggagtggctcgggccttcctgcgcgctcaggctgcactgtttggctcc
tatcgagatgctctgagatacaagcccggagaggaaatcaccttctgtgaagagagcttc
gtggcacaccgctccagcaccatgaagagttttcttgagatggctgtgaacctgcagctc
ttcaagcagttcatcgatggcagactggccaaattaaatgaaggaaggggtttcacagat
gtctttgaagaagagatcacagaggggggcttttgcggaagtaattctaggtcttatcaa
cagtggatgcataccgtgaagaaaggcgtgaataaggcgagtccggtggtgaaatctgct
tacaagattgcaaaagttcatgcaaaaaaaggcttacgcggtgtgaaggaccggatgaga
cttaaggacactgaggaggaaggtgttctgtactgtacaggttctcccaccagcactaaa
agcctttcaccgagaaggctacagaagagaaggtaccagaatcaaaattcccataagtat
gccgactttccggactatcccattgacatggaagatgaactggacacagctagcaaaatc
tcctcagaggacagtggggagacgccattctacatggaggacagtgatgactcgtgcgag
ttggaccatgaggcaggacagacaggccaaatgaatttgctggaagagatcctagattca
ctgagcaccactacgttagatcatggctcaagactctcctcagccaagagccttgatttc
ttcaggtccatggatgagatcgactgcagtaccacgaatatgtctctaggtaagaccagt
ccagttcaggctggtgaagtgggcactgccaccagtggagatcagagtggctggaacatg
gggcaggatgacagcgccatcaatggcaagcacctccctccttctcctcgtcgccaatgc
agcactcgctcactgccagcaacttctaccaaaccctgcgagacccttgcagacacgagg
aattctctcacggagcctcccactcagcccttggcatttgaaataggcgagagcgccagc
cctcctgtccagctagagcttccctcggacctgaaactgagcccagagacagagggctgc
agtggcctgaggaggaaagtcctatccagagagactctgaggcactaccaggagctttca
caacatggtggaagtaataggcagtcctcacttcttattccttgggagaaagagaacaaa
ggcagcagagaagagatggtccaagaggaggccgtggtgcaggaaaaaggcttgctggag
gaaattgagtgtcgcctcaatgcagcactgaactctaacttgtaa
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