Ictalurus punctatus (channel catfish): 108271097
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Entry
108271097 CDS
T04658
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108271097
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
108271097
NCBI-ProteinID:
XP_017333858
Ensembl:
ENSIPUG00000005600
UniProt:
A0A2D0RTM8
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Position
10:complement(28544648..28550262)
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AA seq
738 aa
AA seq
DB search
MKQAHERNQECLPPKKRDLPVSNASTVPNNNSSSSSSNTGGGGGGGEEAATSSSQSSGAS
GEPQGGSGGGEWVRTQPNLHFGVEGPESMAQGLPVEQYSMLYKVAVPSVTYSPTSLHPVL
GHISPAYTVPSTLLQHTGIHYPSLGYAPIPQFVSPSYATAVPYAVPPGFVPSSLIPAQSH
LVPYPSVIQEGVVSSPPQQQVSAHAYAKVAATGGVPLVLASEQAVASSSSSSSSSQQALG
AIGMIPTAERVPVFYHTSASDRVTQPQSGSMEQDREVNGGNRENGRDVVYMARNAVVRPQ
QQGMAMTMEMQMDRKICRQEGRASPGQRSTPDMDLEVQQVVGRLASPVRGASRREGAHGS
SQSSREVQGESRTAYTSHPGSQLDPRALLHPQHPGHTVILPNGQPLLLPLDYHPLPHPHP
QPNNDTAAETPQHKISDASGVAERVLATELPAVPAVPAVPPPSHFTKGAIIQLATGELKR
VEDLQTQDFVRSAEASTGLKIDSSMVVDVRASSQRPGLVALRFAVGERQSKVSIDVPPEH
PFFVFGQGWSSCSPERTAQLYGLTCHHLQAGDVCVSITLQQHSAPHQKPPSISQQPQQPT
HSRTSAKANSTSGASSSQPMGPPAPQIPRPAQGQLRTERVHRERADKDESLKLSASGHGD
VPSRPDRTSAEHTRSQSSYYLHTEAHGPSQRRWSTPGFQRYPVKREEGGLSAPPGSSRPS
FIPQEVKLSIEGRSNAGK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagctcacgagcgcaatcaggagtgcctccctccgaagaagcgggaccttccg
gttagcaatgcttccactgttcctaacaacaacagcagcagcagcagcagtaatactgga
ggtggaggaggaggaggagaggaagcagcgacgtcgtcgtcacagagctccggagcgagc
ggagaacctcagggtggaagtggaggcggcgaatgggtccggactcaacctaacctgcat
ttcggagtggagggtccagagagcatggcccagggattacctgtggagcagtatagcatg
ctgtataaagtagccgttccgtcggtcacctactcgcccaccagccttcacccggtgctg
ggccacatctctccagcctacacggttccctcaacgctcctccagcacacaggcattcat
tacccttctctcggctacgctcccatcccgcagttcgtcagcccatcatatgccaccgca
gttccctatgcagtccccccagggttcgtccccagctccttgataccggctcagtctcac
ctggtgccctatccatccgtcatccaggaaggcgtggtttcgtccccgcctcagcagcaa
gtttccgctcatgcctacgccaaagtagcggctacaggaggcgtcccgttggtgctggcg
tccgagcaggcagtggcctcttcgtcatcctcctcgtcctcctcgcagcaggctctaggc
gccatcgggatgattccgacggcagagcgcgtccccgtgttctaccacacgtcggccagc
gatcgagtcacgcagcctcaaagcggctcgatggagcaggaccgagaggtgaacggaggg
aatcgggaaaacggcagggacgtggtttacatggcgagaaacgcggtggtgcggccgcag
cagcaaggcatggcgatgacgatggagatgcagatggaccggaagatctgcaggcaggaa
ggaagagcatcgcctggccagcgcagcacaccggacatggacctggaggtccaacaagtg
gtggggcgtctggcgtcgccggtccgcggcgcgagtcggagagagggagcgcacggctcg
tctcagagcagcagagaggttcagggggagagtaggacggcgtacacgtcgcaccccggc
agccagctggaccctcgagctctgcttcatcctcagcaccccggtcatacagtgatcctg
ccgaatgggcagccgcttctcctgcccctggactaccatcctcttcctcatcctcatccc
cagcctaataacgacaccgcagccgaaacgccacagcacaaaatctcagatgcctcaggc
gtggccgagcgcgtgctggcgacggagctacccgccgtgccagctgtccccgccgtgcct
ccgccctcgcacttcaccaagggcgccatcatccagttagcaacgggcgagctgaagcgc
gtagaggatctacaaacgcaggattttgtacgcagcgccgaagccagcacgggactgaag
atcgactcgagcatggtggtggacgtacgtgctagctcccagaggcccggtctggtcgcg
ctacgcttcgccgtcggcgagcgccagagcaaagtgagcatcgacgttcctcccgagcac
ccgttcttcgtcttcggtcagggctggtcatcctgcagcccagaacgcaccgcgcagctc
tacggcctcacctgccaccacctccaagcgggcgacgtctgcgtatccatcacacttcag
cagcattcggccccgcaccaaaagccaccgtcgatctcccagcagccgcagcaaccgaca
cacagcaggacttccgccaaagccaactcgacgtcaggagcgtcctccagccaaccaatg
ggacctccggcgccccagatcccgcggccagctcagggtcagctcaggacggaacgcgtt
caccgagagagagccgacaaggacgagtccttaaagctgagcgcctcgggacacggagac
gtgccctccagacccgacaggacttcggcggagcacacgcgcagccagagcagttattat
ttgcacaccgaggcccacgggccctcacagaggcgttggtcaacccccggtttccaaaga
taccccgtcaagagggaggagggaggcctatccgcgccgccgggctcctctcggccctcg
ttcatccctcaggaggtcaaactatccatcgaggggcgctccaacgccgggaagtag
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